Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 8 studies | 27% ± 14% | |
lung | 8 studies | 30% ± 12% | |
peripheral blood | 7 studies | 24% ± 5% | |
brain | 6 studies | 33% ± 14% | |
kidney | 5 studies | 24% ± 6% | |
pancreas | 4 studies | 59% ± 20% | |
eye | 4 studies | 26% ± 11% | |
uterus | 4 studies | 27% ± 13% | |
placenta | 3 studies | 46% ± 21% | |
liver | 3 studies | 30% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 2714.25 | 180 / 180 | 100% | 8.51 | 430 / 430 |
prostate | 100% | 2746.18 | 245 / 245 | 100% | 4.54 | 502 / 502 |
esophagus | 100% | 1886.08 | 1444 / 1445 | 100% | 5.68 | 183 / 183 |
brain | 100% | 2051.69 | 2640 / 2642 | 100% | 4.87 | 705 / 705 |
stomach | 100% | 2171.21 | 359 / 359 | 100% | 5.84 | 285 / 286 |
intestine | 100% | 2158.42 | 966 / 966 | 100% | 5.34 | 525 / 527 |
breast | 100% | 2340.31 | 459 / 459 | 99% | 3.52 | 1112 / 1118 |
pancreas | 100% | 2333.01 | 328 / 328 | 99% | 3.30 | 177 / 178 |
thymus | 100% | 3407.44 | 653 / 653 | 99% | 3.46 | 600 / 605 |
adrenal gland | 100% | 3464.68 | 258 / 258 | 99% | 4.03 | 228 / 230 |
uterus | 100% | 2435.88 | 170 / 170 | 99% | 3.55 | 453 / 459 |
bladder | 100% | 2151.67 | 21 / 21 | 98% | 4.36 | 496 / 504 |
lung | 100% | 2126.29 | 576 / 578 | 98% | 3.64 | 1134 / 1155 |
skin | 100% | 2181.86 | 1808 / 1809 | 96% | 3.63 | 454 / 472 |
liver | 100% | 2795.31 | 226 / 226 | 96% | 2.83 | 389 / 406 |
kidney | 100% | 2479.66 | 89 / 89 | 95% | 2.87 | 854 / 901 |
adipose | 100% | 2041.91 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 2.50 | 29 / 29 |
spleen | 100% | 2426.11 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.10 | 1 / 1 |
blood vessel | 100% | 2281.40 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 1213.56 | 840 / 861 | 0% | 0 | 0 / 0 |
muscle | 97% | 865.36 | 775 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 2.82 | 77 / 80 |
tonsil | 0% | 0 | 0 / 0 | 91% | 1.91 | 41 / 45 |
peripheral blood | 77% | 991.21 | 711 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010629 | Biological process | negative regulation of gene expression |
GO_0010988 | Biological process | regulation of low-density lipoprotein particle clearance |
GO_1905599 | Biological process | positive regulation of low-density lipoprotein receptor activity |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005515 | Molecular function | protein binding |
Gene name | CNPY2 |
Protein name | Canopy FGF signaling regulator 2 Protein canopy homolog 2 (MIR-interacting saposin-like protein) (Putative secreted protein Zsig9) (Transmembrane protein 4) |
Synonyms | TMEM4 UNQ1943/PRO4426 ZSIG9 MSAP |
Description | FUNCTION: Positive regulator of neurite outgrowth by stabilizing myosin regulatory light chain (MRLC). It prevents MIR-mediated MRLC ubiquitination and its subsequent proteasomal degradation. |
Accessions | ENST00000546466.5 ENST00000551286.1 H0YIH9 Q9Y2B0 H0YI18 ENST00000551475.5 F8VXJ7 ENST00000553191.1 ENST00000273308.9 [Q9Y2B0-1] F8W1K5 |