Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2540.66 | 1445 / 1445 | 100% | 50.25 | 183 / 183 |
ovary | 100% | 2900.60 | 180 / 180 | 100% | 43.91 | 430 / 430 |
pancreas | 100% | 2878.99 | 328 / 328 | 100% | 45.99 | 178 / 178 |
breast | 100% | 3200.09 | 459 / 459 | 100% | 50.49 | 1117 / 1118 |
brain | 100% | 2019.64 | 2636 / 2642 | 100% | 45.86 | 705 / 705 |
lung | 100% | 3475.30 | 578 / 578 | 100% | 45.46 | 1152 / 1155 |
prostate | 100% | 3046.24 | 245 / 245 | 100% | 40.83 | 500 / 502 |
thymus | 100% | 2978.23 | 653 / 653 | 100% | 44.56 | 602 / 605 |
bladder | 100% | 2694.76 | 21 / 21 | 99% | 42.58 | 499 / 504 |
kidney | 100% | 3219.55 | 89 / 89 | 99% | 43.47 | 892 / 901 |
uterus | 100% | 3304.94 | 170 / 170 | 99% | 68.23 | 454 / 459 |
liver | 100% | 2883.75 | 226 / 226 | 99% | 28.07 | 401 / 406 |
intestine | 100% | 3411.08 | 966 / 966 | 98% | 35.57 | 518 / 527 |
stomach | 100% | 2417.24 | 359 / 359 | 98% | 37.99 | 280 / 286 |
adrenal gland | 100% | 3757.33 | 258 / 258 | 96% | 25.15 | 221 / 230 |
skin | 100% | 3494.74 | 1808 / 1809 | 92% | 41.25 | 434 / 472 |
adipose | 100% | 3459.00 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2262.26 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 39.39 | 29 / 29 |
muscle | 100% | 2564.13 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3960.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.78 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.29 | 1 / 1 |
heart | 99% | 2135.49 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 90% | 2127.95 | 836 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 66% | 12.67 | 53 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_2000377 | Biological process | regulation of reactive oxygen species metabolic process |
GO_1901222 | Biological process | regulation of non-canonical NF-kappaB signal transduction |
GO_0000209 | Biological process | protein polyubiquitination |
GO_2000116 | Biological process | regulation of cysteine-type endopeptidase activity |
GO_1902523 | Biological process | positive regulation of protein K63-linked ubiquitination |
GO_1902443 | Biological process | negative regulation of ripoptosome assembly involved in necroptotic process |
GO_0007249 | Biological process | canonical NF-kappaB signal transduction |
GO_0060544 | Biological process | regulation of necroptotic process |
GO_1902527 | Biological process | positive regulation of protein monoubiquitination |
GO_0050727 | Biological process | regulation of inflammatory response |
GO_0045471 | Biological process | response to ethanol |
GO_0001890 | Biological process | placenta development |
GO_1902524 | Biological process | positive regulation of protein K48-linked ubiquitination |
GO_0045088 | Biological process | regulation of innate immune response |
GO_0051591 | Biological process | response to cAMP |
GO_0039535 | Biological process | regulation of RIG-I signaling pathway |
GO_0042981 | Biological process | regulation of apoptotic process |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_0060546 | Biological process | negative regulation of necroptotic process |
GO_0045595 | Biological process | regulation of cell differentiation |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0001666 | Biological process | response to hypoxia |
GO_0042127 | Biological process | regulation of cell population proliferation |
GO_0043123 | Biological process | positive regulation of canonical NF-kappaB signal transduction |
GO_0070424 | Biological process | regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway |
GO_0006915 | Biological process | apoptotic process |
GO_0031398 | Biological process | positive regulation of protein ubiquitination |
GO_0070266 | Biological process | necroptotic process |
GO_0038061 | Biological process | non-canonical NF-kappaB signal transduction |
GO_0034121 | Biological process | regulation of toll-like receptor signaling pathway |
GO_0033209 | Biological process | tumor necrosis factor-mediated signaling pathway |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0009898 | Cellular component | cytoplasmic side of plasma membrane |
GO_0035631 | Cellular component | CD40 receptor complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0001741 | Cellular component | XY body |
GO_0005634 | Cellular component | nucleus |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0043027 | Molecular function | cysteine-type endopeptidase inhibitor activity involved in apoptotic process |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0016740 | Molecular function | transferase activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0098770 | Molecular function | FBXO family protein binding |
GO_0051087 | Molecular function | protein-folding chaperone binding |
GO_0008270 | Molecular function | zinc ion binding |
GO_0004842 | Molecular function | ubiquitin-protein transferase activity |
GO_0003713 | Molecular function | transcription coactivator activity |
GO_0005515 | Molecular function | protein binding |
GO_0043130 | Molecular function | ubiquitin binding |
Gene name | BIRC2 |
Protein name | Baculoviral IAP repeat-containing protein 2 (EC 2.3.2.27) (Cellular inhibitor of apoptosis 1) (C-IAP1) (IAP homolog B) (Inhibitor of apoptosis protein 2) (hIAP-2) (hIAP2) (RING finger protein 48) (RING-type E3 ubiquitin transferase BIRC2) (TNFR2-TRAF-signaling complex protein 2) Baculoviral IAP repeat containing 2 |
Synonyms | RNF48 API1 MIHB |
Description | FUNCTION: Multi-functional protein which regulates not only caspases and apoptosis, but also modulates inflammatory signaling and immunity, mitogenic kinase signaling, and cell proliferation, as well as cell invasion and metastasis. Acts as an E3 ubiquitin-protein ligase regulating NF-kappa-B signaling and regulates both canonical and non-canonical NF-kappa-B signaling by acting in opposite directions: acts as a positive regulator of the canonical pathway and suppresses constitutive activation of non-canonical NF-kappa-B signaling. The target proteins for its E3 ubiquitin-protein ligase activity include: RIPK1, RIPK2, RIPK3, RIPK4, CASP3, CASP7, CASP8, TRAF2, DIABLO/SMAC, MAP3K14/NIK, MAP3K5/ASK1, IKBKG/NEMO, IKBKE and MXD1/MAD1. Can also function as an E3 ubiquitin-protein ligase of the NEDD8 conjugation pathway, targeting effector caspases for neddylation and inactivation. Acts as an important regulator of innate immune signaling via regulation of Toll-like receptors (TLRs), Nodlike receptors (NLRs) and RIG-I like receptors (RLRs), collectively referred to as pattern recognition receptors (PRRs). Protects cells from spontaneous formation of the ripoptosome, a large multi-protein complex that has the capability to kill cancer cells in a caspase-dependent and caspase-independent manner. Suppresses ripoptosome formation by ubiquitinating RIPK1 and CASP8. Can stimulate the transcriptional activity of E2F1. Plays a role in the modulation of the cell cycle. . |
Accessions | H0YDY3 E9PQZ9 E9PMH5 E9PNM6 ENST00000527465.1 ENST00000528344.1 ENST00000532672.5 ENST00000532832.5 E9PI77 ENST00000533742.5 Q13490 ENST00000530675.5 [Q13490-2] ENST00000613397.4 [Q13490-1] ENST00000531259.5 E9PIW1 ENST00000227758.7 [Q13490-1] |