Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| peripheral blood | 17 studies | 29% ± 9% | |
| lung | 11 studies | 28% ± 8% | |
| lymph node | 5 studies | 36% ± 11% | |
| bone marrow | 4 studies | 26% ± 9% | |
| intestine | 3 studies | 26% ± 5% | |
| brain | 3 studies | 47% ± 25% | |
| liver | 3 studies | 46% ± 6% | |
| uterus | 3 studies | 25% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| lung | 100% | 5427.67 | 578 / 578 | 94% | 61.56 | 1083 / 1155 |
| breast | 85% | 598.99 | 391 / 459 | 94% | 40.20 | 1050 / 1118 |
| intestine | 85% | 636.63 | 820 / 966 | 82% | 29.77 | 434 / 527 |
| stomach | 75% | 502.24 | 268 / 359 | 85% | 37.38 | 243 / 286 |
| bladder | 90% | 881.14 | 19 / 21 | 68% | 28.06 | 343 / 504 |
| esophagus | 69% | 449.40 | 1001 / 1445 | 78% | 20.78 | 142 / 183 |
| uterus | 67% | 434.71 | 114 / 170 | 76% | 25.55 | 348 / 459 |
| kidney | 57% | 399.60 | 51 / 89 | 83% | 27.37 | 746 / 901 |
| ovary | 53% | 339.71 | 96 / 180 | 85% | 47.95 | 366 / 430 |
| thymus | 54% | 290.30 | 350 / 653 | 85% | 38.32 | 512 / 605 |
| pancreas | 45% | 262.37 | 146 / 328 | 92% | 81.00 | 164 / 178 |
| prostate | 77% | 486.92 | 188 / 245 | 48% | 7.91 | 242 / 502 |
| brain | 37% | 303.88 | 972 / 2642 | 86% | 75.61 | 607 / 705 |
| adrenal gland | 90% | 989.14 | 231 / 258 | 21% | 4.78 | 48 / 230 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 194.60 | 29 / 29 |
| spleen | 100% | 4954.88 | 241 / 241 | 0% | 0 | 0 / 0 |
| peripheral blood | 99% | 38000.88 | 917 / 929 | 0% | 0 | 0 / 0 |
| adipose | 95% | 1232.08 | 1140 / 1204 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 93% | 39.50 | 42 / 45 |
| blood vessel | 88% | 956.43 | 1170 / 1335 | 0% | 0 | 0 / 0 |
| skin | 20% | 77.82 | 358 / 1809 | 60% | 20.00 | 285 / 472 |
| liver | 17% | 89.39 | 38 / 226 | 26% | 6.75 | 104 / 406 |
| heart | 39% | 213.43 | 332 / 861 | 0% | 0 | 0 / 0 |
| muscle | 3% | 11.10 | 25 / 803 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.12 | 1 / 80 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0098869 | Biological process | cellular oxidant detoxification |
| GO_0002540 | Biological process | leukotriene production involved in inflammatory response |
| GO_0019372 | Biological process | lipoxygenase pathway |
| GO_0019370 | Biological process | leukotriene biosynthetic process |
| GO_0070207 | Biological process | protein homotrimerization |
| GO_0071277 | Biological process | cellular response to calcium ion |
| GO_0002675 | Biological process | positive regulation of acute inflammatory response |
| GO_0016020 | Cellular component | membrane |
| GO_0005789 | Cellular component | endoplasmic reticulum membrane |
| GO_0005635 | Cellular component | nuclear envelope |
| GO_0005783 | Cellular component | endoplasmic reticulum |
| GO_0031965 | Cellular component | nuclear membrane |
| GO_0019899 | Molecular function | enzyme binding |
| GO_0008047 | Molecular function | enzyme activator activity |
| GO_0004051 | Molecular function | arachidonate 5-lipoxygenase activity |
| GO_0044877 | Molecular function | protein-containing complex binding |
| GO_0004602 | Molecular function | glutathione peroxidase activity |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0004364 | Molecular function | glutathione transferase activity |
| GO_0050544 | Molecular function | arachidonic acid binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0004464 | Molecular function | leukotriene-C4 synthase activity |
| Gene name | ALOX5AP |
| Protein name | Arachidonate 5-lipoxygenase-activating protein (FLAP) (MK-886-binding protein) Arachidonate 5-lipoxygenase-activating protein |
| Synonyms | FLAP |
| Description | FUNCTION: Required for leukotriene biosynthesis by ALOX5 (5-lipoxygenase). Anchors ALOX5 to the membrane. Binds arachidonic acid, and could play an essential role in the transfer of arachidonic acid to ALOX5. Binds to MK-886, a compound that blocks the biosynthesis of leukotrienes. . FUNCTION: Required for leukotriene biosynthesis by ALOX5 (5-lipoxygenase). Anchors ALOX5 to the membrane. Binds arachidonic acid, and could play an essential role in the transfer of arachidonic acid to ALOX5. Binds to MK-886, a compound that blocks the biosynthesis of leukotrienes. . |
| Accessions | ENST00000617770.4 P20292 ENST00000380490.5 A0A087WW23 |