Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 4040.96 | 2635 / 2642 | 100% | 96.72 | 705 / 705 |
breast | 100% | 5573.84 | 458 / 459 | 90% | 15.49 | 1004 / 1118 |
thymus | 99% | 4009.23 | 647 / 653 | 85% | 10.91 | 517 / 605 |
prostate | 98% | 4348.29 | 241 / 245 | 85% | 9.96 | 426 / 502 |
lung | 100% | 5249.44 | 576 / 578 | 82% | 9.97 | 952 / 1155 |
adrenal gland | 85% | 1571.45 | 220 / 258 | 87% | 20.30 | 200 / 230 |
esophagus | 81% | 5669.11 | 1169 / 1445 | 89% | 13.38 | 163 / 183 |
kidney | 72% | 1533.80 | 64 / 89 | 81% | 16.66 | 728 / 901 |
intestine | 92% | 9534.77 | 886 / 966 | 60% | 7.56 | 315 / 527 |
bladder | 100% | 7609.90 | 21 / 21 | 51% | 5.90 | 257 / 504 |
uterus | 99% | 9877.85 | 169 / 170 | 50% | 8.40 | 231 / 459 |
stomach | 64% | 4887.36 | 229 / 359 | 80% | 13.09 | 228 / 286 |
skin | 83% | 5456.45 | 1500 / 1809 | 59% | 9.47 | 279 / 472 |
ovary | 96% | 2638.01 | 173 / 180 | 33% | 2.62 | 144 / 430 |
pancreas | 11% | 185.31 | 35 / 328 | 94% | 19.51 | 167 / 178 |
adipose | 100% | 7285.39 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9503.77 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 7416.61 | 803 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3853.83 | 855 / 861 | 0% | 0 | 0 / 0 |
spleen | 95% | 1942.80 | 228 / 241 | 0% | 0 | 0 / 0 |
liver | 24% | 346.45 | 54 / 226 | 66% | 5.36 | 266 / 406 |
lymph node | 0% | 0 | 0 / 0 | 83% | 9.58 | 24 / 29 |
tonsil | 0% | 0 | 0 / 0 | 49% | 3.82 | 22 / 45 |
peripheral blood | 32% | 1312.75 | 293 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 8% | 0.43 | 6 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0017015 | Biological process | regulation of transforming growth factor beta receptor signaling pathway |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0071560 | Biological process | cellular response to transforming growth factor beta stimulus |
GO_0048596 | Biological process | embryonic camera-type eye morphogenesis |
GO_0030900 | Biological process | forebrain development |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0048704 | Biological process | embryonic skeletal system morphogenesis |
GO_0090103 | Biological process | cochlea morphogenesis |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0014823 | Biological process | response to activity |
GO_0045602 | Biological process | negative regulation of endothelial cell differentiation |
GO_0010839 | Biological process | negative regulation of keratinocyte proliferation |
GO_0031667 | Biological process | response to nutrient levels |
GO_0010464 | Biological process | regulation of mesenchymal cell proliferation |
GO_0048752 | Biological process | semicircular canal morphogenesis |
GO_0030154 | Biological process | cell differentiation |
GO_0071230 | Biological process | cellular response to amino acid stimulus |
GO_0048856 | Biological process | anatomical structure development |
GO_0045666 | Biological process | positive regulation of neuron differentiation |
GO_0033081 | Biological process | regulation of T cell differentiation in thymus |
GO_0051216 | Biological process | cartilage development |
GO_0051150 | Biological process | regulation of smooth muscle cell differentiation |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0043616 | Biological process | keratinocyte proliferation |
GO_0007389 | Biological process | pattern specification process |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001227 | Molecular function | DNA-binding transcription repressor activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_0003682 | Molecular function | chromatin binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0008270 | Molecular function | zinc ion binding |
GO_0070888 | Molecular function | E-box binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ZEB1 |
Protein name | ZEB1 protein Alternative protein ZEB1 Zinc finger E-box-binding homeobox 1 (NIL-2-A zinc finger protein) (Negative regulator of IL2) (Transcription factor 8) (TCF-8) Zinc finger E-box binding homeobox 1 Zinc finger E-box-binding homeobox 1 |
Synonyms | TCF8 AREB6 |
Description | FUNCTION: Acts as a transcriptional repressor. Inhibits interleukin-2 (IL-2) gene expression. Enhances or represses the promoter activity of the ATP1A1 gene depending on the quantity of cDNA and on the cell type. Represses E-cadherin promoter and induces an epithelial-mesenchymal transition (EMT) by recruiting SMARCA4/BRG1. Represses BCL6 transcription in the presence of the corepressor CTBP1. Positively regulates neuronal differentiation. Represses RCOR1 transcription activation during neurogenesis. Represses transcription by binding to the E box (5'-CANNTG-3'). In the absence of TGFB1, acts as a repressor of COL1A2 transcription via binding to the E-box in the upstream enhancer region (By similarity). . |
Accessions | F6TDF5 ENST00000446923.7 [P37275-5] ENST00000561212.5 ENST00000558440.5 Q32Q63 P37275 ENST00000542815.7 [P37275-3] ENST00000424869.6 [P37275-2] ENST00000424869 L0R5E9 ENST00000560721.6 [P37275-4] L8EAF3 H0YND9 ENST00000320985.14 [P37275-1] H0YMD3 A0JLS9 ENST00000437844.6 F6U0D0 |