VASP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	32 studies	31% ± 11%	Explore
macrophage	30 studies	33% ± 15%	Explore
B cell	28 studies	30% ± 8%	Explore
non-classical monocyte	25 studies	60% ± 21%	Explore
conventional dendritic cell	24 studies	42% ± 17%	Explore
CD8-positive, alpha-beta T cell	24 studies	24% ± 7%	Explore
classical monocyte	24 studies	44% ± 16%	Explore
CD4-positive, alpha-beta T cell	21 studies	21% ± 6%	Explore
monocyte	20 studies	42% ± 13%	Explore
endothelial cell	20 studies	25% ± 8%	Explore
pericyte	20 studies	23% ± 6%	Explore
memory B cell	18 studies	30% ± 8%	Explore
smooth muscle cell	17 studies	22% ± 6%	Explore
T cell	16 studies	23% ± 8%	Explore
regulatory T cell	16 studies	24% ± 6%	Explore
dendritic cell	14 studies	47% ± 22%	Explore
mast cell	14 studies	24% ± 8%	Explore
naive B cell	14 studies	23% ± 8%	Explore
mature NK T cell	13 studies	26% ± 9%	Explore
gamma-delta T cell	13 studies	29% ± 7%	Explore
myeloid cell	13 studies	37% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	12 studies	33% ± 11%	Explore
neutrophil	11 studies	42% ± 8%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	28% ± 9%	Explore
epithelial cell	9 studies	35% ± 15%	Explore
alveolar macrophage	8 studies	43% ± 16%	Explore
basal cell	8 studies	22% ± 7%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	28% ± 10%	Explore
leukocyte	7 studies	24% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	25% ± 8%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	23% ± 6%	Explore
goblet cell	7 studies	26% ± 8%	Explore
mucosal invariant T cell	7 studies	20% ± 3%	Explore
capillary endothelial cell	7 studies	21% ± 4%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	26% ± 9%	Explore
platelet	6 studies	25% ± 3%	Explore
mononuclear phagocyte	6 studies	36% ± 14%	Explore
megakaryocyte	6 studies	66% ± 18%	Explore
vein endothelial cell	6 studies	18% ± 3%	Explore
innate lymphoid cell	6 studies	26% ± 8%	Explore
T follicular helper cell	6 studies	18% ± 2%	Explore
endothelial cell of artery	5 studies	21% ± 7%	Explore
intermediate monocyte	5 studies	53% ± 24%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	26% ± 8%	Explore
secretory cell	5 studies	22% ± 4%	Explore
plasmacytoid dendritic cell	4 studies	23% ± 5%	Explore
exhausted T cell	4 studies	33% ± 13%	Explore
hematopoietic precursor cell	4 studies	31% ± 9%	Explore
myofibroblast cell	4 studies	24% ± 5%	Explore
immature B cell	4 studies	29% ± 11%	Explore
microglial cell	4 studies	23% ± 7%	Explore
abnormal cell	4 studies	21% ± 4%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	30% ± 9%	Explore
endothelial cell of vascular tree	4 studies	23% ± 5%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	20% ± 4%	Explore
connective tissue cell	4 studies	24% ± 10%	Explore
T-helper 17 cell	4 studies	26% ± 8%	Explore
plasmablast	3 studies	31% ± 10%	Explore
monocyte-derived dendritic cell	3 studies	44% ± 20%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	3 studies	19% ± 1%	Explore
extravillous trophoblast	3 studies	53% ± 18%	Explore
plasma cell	3 studies	26% ± 13%	Explore
fibroblast	3 studies	26% ± 4%	Explore
tissue-resident macrophage	3 studies	25% ± 6%	Explore
ciliated cell	3 studies	25% ± 7%	Explore
intraepithelial lymphocyte	3 studies	31% ± 7%	Explore
germinal center B cell	3 studies	39% ± 4%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	30% ± 2%	Explore
type I pneumocyte	3 studies	20% ± 5%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	43% ± 14%	Explore
enterocyte	3 studies	20% ± 3%	Explore
enteroendocrine cell	3 studies	26% ± 4%	Explore
group 3 innate lymphoid cell	3 studies	25% ± 7%	Explore
brush cell	3 studies	23% ± 6%	Explore
T-helper 1 cell	3 studies	33% ± 11%	Explore
hematopoietic stem cell	3 studies	24% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	15 studies	30% ± 9%	Explore
lung	12 studies	26% ± 9%	Explore
intestine	6 studies	20% ± 5%	Explore
lymph node	4 studies	23% ± 3%	Explore
liver	4 studies	21% ± 3%	Explore
placenta	3 studies	27% ± 5%	Explore
bone marrow	3 studies	25% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	8635.10	21 / 21	100%	161.32	504 / 504
esophagus	100%	7653.24	1445 / 1445	100%	116.11	183 / 183
intestine	100%	10014.45	966 / 966	100%	177.12	527 / 527
uterus	100%	7022.98	170 / 170	100%	141.22	459 / 459
skin	100%	4352.59	1805 / 1809	100%	88.53	472 / 472
lung	100%	7708.29	577 / 578	100%	117.68	1154 / 1155
stomach	100%	5841.92	358 / 359	100%	163.93	286 / 286
thymus	100%	3586.21	651 / 653	100%	91.56	604 / 605
breast	100%	5344.45	459 / 459	99%	112.06	1110 / 1118
prostate	100%	6139.97	244 / 245	100%	97.62	500 / 502
kidney	98%	3733.03	87 / 89	99%	76.07	896 / 901
adrenal gland	100%	3114.57	257 / 258	92%	46.31	212 / 230
ovary	88%	2449.53	158 / 180	100%	85.89	430 / 430
liver	75%	1819.13	170 / 226	94%	61.56	383 / 406
pancreas	56%	1115.09	185 / 328	99%	214.08	177 / 178
adipose	100%	5779.92	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	233.43	29 / 29
peripheral blood	100%	33350.04	929 / 929	0%	0	0 / 0
spleen	100%	14374.19	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	108.77	45 / 45
ureter	0%	0	0 / 0	100%	78.51	1 / 1
blood vessel	100%	7884.91	1333 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	98%	43.07	78 / 80
heart	96%	2866.06	827 / 861	0%	0	0 / 0
brain	17%	273.98	442 / 2642	77%	33.18	541 / 705
muscle	22%	345.91	175 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0