Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 14 studies | 39% ± 22% | |
intestine | 8 studies | 36% ± 21% | |
peripheral blood | 7 studies | 26% ± 13% | |
kidney | 7 studies | 29% ± 11% | |
lymph node | 5 studies | 33% ± 18% | |
brain | 5 studies | 31% ± 10% | |
pancreas | 4 studies | 78% ± 18% | |
placenta | 4 studies | 59% ± 28% | |
prostate | 4 studies | 49% ± 17% | |
breast | 4 studies | 35% ± 10% | |
thymus | 3 studies | 37% ± 12% | |
bone marrow | 3 studies | 23% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 9016.59 | 328 / 328 | 98% | 105.41 | 175 / 178 |
thymus | 100% | 22887.45 | 653 / 653 | 97% | 110.50 | 587 / 605 |
lung | 98% | 8720.82 | 567 / 578 | 98% | 99.20 | 1129 / 1155 |
ovary | 93% | 5420.61 | 168 / 180 | 99% | 162.25 | 426 / 430 |
prostate | 92% | 9465.53 | 225 / 245 | 97% | 81.38 | 489 / 502 |
kidney | 100% | 12621.33 | 89 / 89 | 87% | 45.53 | 782 / 901 |
bladder | 81% | 6914.81 | 17 / 21 | 94% | 114.78 | 474 / 504 |
stomach | 76% | 8710.17 | 272 / 359 | 97% | 100.79 | 276 / 286 |
breast | 59% | 7308.25 | 270 / 459 | 97% | 91.40 | 1087 / 1118 |
intestine | 49% | 8910.41 | 475 / 966 | 98% | 113.78 | 515 / 527 |
esophagus | 39% | 8006.78 | 560 / 1445 | 99% | 76.35 | 181 / 183 |
uterus | 24% | 1202.06 | 41 / 170 | 88% | 103.39 | 404 / 459 |
tonsil | 0% | 0 | 0 / 0 | 100% | 79.85 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 34.27 | 1 / 1 |
adrenal gland | 63% | 2175.72 | 162 / 258 | 28% | 9.70 | 65 / 230 |
spleen | 86% | 3217.74 | 207 / 241 | 0% | 0 | 0 / 0 |
skin | 72% | 11302.34 | 1304 / 1809 | 3% | 0.92 | 14 / 472 |
brain | 71% | 3340.94 | 1881 / 2642 | 0% | 0.09 | 3 / 705 |
blood vessel | 67% | 8921.44 | 893 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 41% | 12.48 | 12 / 29 |
peripheral blood | 39% | 1272.14 | 361 / 929 | 0% | 0 | 0 / 0 |
liver | 2% | 51.65 | 4 / 226 | 15% | 10.44 | 61 / 406 |
adipose | 2% | 64.00 | 20 / 1204 | 0% | 0 | 0 / 0 |
heart | 1% | 17.69 | 6 / 861 | 0% | 0 | 0 / 0 |
muscle | 0% | 3.37 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071711 | Biological process | basement membrane organization |
GO_0007163 | Biological process | establishment or maintenance of cell polarity |
GO_2000178 | Biological process | negative regulation of neural precursor cell proliferation |
GO_0071773 | Biological process | cellular response to BMP stimulus |
GO_2000146 | Biological process | negative regulation of cell motility |
GO_0001843 | Biological process | neural tube closure |
GO_0060672 | Biological process | epithelial cell morphogenesis involved in placental branching |
GO_0022408 | Biological process | negative regulation of cell-cell adhesion |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0004866 | Molecular function | endopeptidase inhibitor activity |
GO_0004867 | Molecular function | serine-type endopeptidase inhibitor activity |
Gene name | SPINT2 |
Protein name | Kunitz-type protease inhibitor 2 (Hepatocyte growth factor activator inhibitor type 2) (HAI-2) (Placental bikunin) SPINT2 protein Serine peptidase inhibitor, Kunitz type 2 |
Synonyms | KOP HAI2 |
Description | FUNCTION: Inhibitor of HGFAC . Also inhibits plasmin, and plasma and tissue kallikrein . Inhibits serine protease activity of TMPRSS13 . Inhibits serine protease activity of ST14/matriptase in vitro . . |
Accessions | K7EKC8 ENST00000590510.5 K7ES27 ENST00000587090.5 O43291 ENST00000301244.12 [O43291-1] ENST00000592007.1 K7EJS4 K7EKQ0 ENST00000587516.5 ENST00000587334.1 ENST00000590738.1 K7EM91 K7ESI5 Q6LEU8 ENST00000454580.7 [O43291-2] |