PTPN7 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	35 studies	29% ± 10%	Explore
CD8-positive, alpha-beta T cell	29 studies	32% ± 10%	Explore
T cell	27 studies	28% ± 10%	Explore
CD4-positive, alpha-beta T cell	22 studies	29% ± 11%	Explore
regulatory T cell	20 studies	32% ± 10%	Explore
mast cell	16 studies	28% ± 11%	Explore
mature NK T cell	16 studies	29% ± 8%	Explore
gamma-delta T cell	15 studies	32% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	13 studies	30% ± 11%	Explore
CD16-negative, CD56-bright natural killer cell, human	13 studies	29% ± 9%	Explore
B cell	12 studies	21% ± 6%	Explore
CD8-positive, alpha-beta memory T cell	11 studies	29% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	29% ± 13%	Explore
mucosal invariant T cell	9 studies	23% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	8 studies	31% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	23% ± 5%	Explore
T follicular helper cell	7 studies	36% ± 10%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	31% ± 9%	Explore
memory B cell	6 studies	21% ± 6%	Explore
innate lymphoid cell	6 studies	26% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	19% ± 6%	Explore
naive B cell	5 studies	22% ± 5%	Explore
leukocyte	4 studies	23% ± 5%	Explore
exhausted T cell	4 studies	45% ± 3%	Explore
hematopoietic precursor cell	4 studies	35% ± 8%	Explore
lymphocyte	4 studies	26% ± 9%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	36% ± 14%	Explore
CD4-positive helper T cell	4 studies	24% ± 7%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	32% ± 12%	Explore
T-helper 17 cell	4 studies	35% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	24% ± 4%	Explore
conventional dendritic cell	3 studies	23% ± 6%	Explore
common myeloid progenitor	3 studies	25% ± 6%	Explore
plasma cell	3 studies	24% ± 7%	Explore
intraepithelial lymphocyte	3 studies	41% ± 19%	Explore
germinal center B cell	3 studies	24% ± 5%	Explore
plasmablast	3 studies	23% ± 8%	Explore
granulocyte monocyte progenitor cell	3 studies	32% ± 4%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	34% ± 11%	Explore
group 3 innate lymphoid cell	3 studies	36% ± 12%	Explore
T-helper 1 cell	3 studies	51% ± 15%	Explore
double negative thymocyte	3 studies	36% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	23% ± 7%	Explore
liver	4 studies	21% ± 2%	Explore
lymph node	3 studies	20% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	99%	896.03	573 / 578	92%	8.88	1061 / 1155
kidney	88%	523.16	78 / 89	72%	5.21	652 / 901
stomach	54%	210.50	195 / 359	81%	8.12	233 / 286
intestine	56%	709.71	541 / 966	76%	7.83	403 / 527
adrenal gland	98%	1591.58	253 / 258	24%	7.59	56 / 230
bladder	57%	279.62	12 / 21	63%	5.27	318 / 504
breast	34%	117.30	156 / 459	77%	6.03	862 / 1118
esophagus	35%	126.91	508 / 1445	73%	5.18	134 / 183
prostate	65%	288.59	160 / 245	40%	1.70	200 / 502
thymus	45%	282.08	292 / 653	56%	14.45	341 / 605
lymph node	0%	0	0 / 0	100%	107.07	29 / 29
peripheral blood	100%	4415.81	929 / 929	0%	0	0 / 0
spleen	100%	3896.29	241 / 241	0%	0	0 / 0
uterus	24%	71.31	41 / 170	75%	5.74	346 / 459
tonsil	0%	0	0 / 0	93%	13.92	42 / 45
pancreas	8%	27.13	26 / 328	83%	6.72	147 / 178
skin	11%	31.01	198 / 1809	74%	10.33	347 / 472
brain	30%	406.36	788 / 2642	38%	2.09	269 / 705
ovary	9%	24.97	16 / 180	58%	2.83	251 / 430
liver	22%	60.63	50 / 226	35%	2.08	144 / 406
adipose	57%	217.12	689 / 1204	0%	0	0 / 0
blood vessel	22%	95.54	288 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	15%	1.19	12 / 80
heart	5%	15.16	43 / 861	0%	0	0 / 0
muscle	0%	0.38	1 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1