LSP1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	40 studies	61% ± 22%	Explore
B cell	37 studies	55% ± 19%	Explore
CD8-positive, alpha-beta T cell	37 studies	56% ± 21%	Explore
CD4-positive, alpha-beta T cell	31 studies	54% ± 19%	Explore
conventional dendritic cell	28 studies	79% ± 16%	Explore
macrophage	28 studies	40% ± 20%	Explore
T cell	27 studies	50% ± 20%	Explore
dendritic cell	27 studies	74% ± 23%	Explore
regulatory T cell	26 studies	62% ± 22%	Explore
classical monocyte	25 studies	65% ± 18%	Explore
plasmacytoid dendritic cell	23 studies	76% ± 15%	Explore
non-classical monocyte	22 studies	72% ± 16%	Explore
monocyte	21 studies	57% ± 22%	Explore
mature NK T cell	20 studies	62% ± 19%	Explore
memory B cell	19 studies	65% ± 18%	Explore
naive B cell	19 studies	46% ± 17%	Explore
gamma-delta T cell	18 studies	59% ± 20%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	43% ± 17%	Explore
mucosal invariant T cell	15 studies	50% ± 21%	Explore
plasma cell	15 studies	57% ± 23%	Explore
neutrophil	15 studies	52% ± 29%	Explore
myeloid cell	15 studies	45% ± 20%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	60% ± 21%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	73% ± 15%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	13 studies	58% ± 17%	Explore
effector memory CD8-positive, alpha-beta T cell	12 studies	56% ± 22%	Explore
fibroblast	12 studies	36% ± 13%	Explore
innate lymphoid cell	11 studies	57% ± 14%	Explore
plasmablast	11 studies	59% ± 26%	Explore
CD8-positive, alpha-beta memory T cell	11 studies	62% ± 19%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	58% ± 18%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	65% ± 27%	Explore
leukocyte	7 studies	40% ± 13%	Explore
T follicular helper cell	7 studies	46% ± 12%	Explore
CD4-positive helper T cell	6 studies	35% ± 15%	Explore
IgG plasma cell	6 studies	30% ± 25%	Explore
hematopoietic stem cell	6 studies	33% ± 6%	Explore
effector memory CD4-positive, alpha-beta T cell	6 studies	58% ± 24%	Explore
alveolar macrophage	5 studies	26% ± 10%	Explore
central memory CD8-positive, alpha-beta T cell	5 studies	52% ± 18%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	69% ± 11%	Explore
hematopoietic precursor cell	5 studies	51% ± 23%	Explore
exhausted T cell	5 studies	79% ± 10%	Explore
precursor B cell	5 studies	57% ± 13%	Explore
T-helper 17 cell	5 studies	59% ± 22%	Explore
group 3 innate lymphoid cell	5 studies	73% ± 11%	Explore
immature B cell	5 studies	78% ± 10%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	74% ± 29%	Explore
monocyte-derived dendritic cell	4 studies	73% ± 29%	Explore
connective tissue cell	4 studies	35% ± 19%	Explore
germinal center B cell	4 studies	52% ± 22%	Explore
intermediate monocyte	4 studies	79% ± 13%	Explore
IgA plasma cell	4 studies	40% ± 26%	Explore
T-helper 1 cell	4 studies	69% ± 18%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	70% ± 17%	Explore
Langerhans cell	3 studies	76% ± 9%	Explore
platelet	3 studies	33% ± 19%	Explore
mononuclear phagocyte	3 studies	45% ± 23%	Explore
common myeloid progenitor	3 studies	42% ± 16%	Explore
lymphocyte	3 studies	44% ± 18%	Explore
pro-B cell	3 studies	42% ± 9%	Explore
intraepithelial lymphocyte	3 studies	58% ± 13%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	55% ± 22%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	18 studies	59% ± 14%	Explore
lung	11 studies	26% ± 8%	Explore
intestine	4 studies	30% ± 7%	Explore
bone marrow	4 studies	39% ± 22%	Explore
lymph node	4 studies	51% ± 5%	Explore
kidney	3 studies	49% ± 23%	Explore
liver	3 studies	25% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	97%	3166.92	562 / 578	95%	25.41	1098 / 1155
breast	89%	3409.68	408 / 459	96%	26.79	1074 / 1118
uterus	96%	2823.19	163 / 170	87%	24.51	398 / 459
bladder	100%	5827.48	21 / 21	79%	27.49	400 / 504
stomach	88%	1974.46	316 / 359	83%	18.68	236 / 286
esophagus	81%	2247.96	1168 / 1445	83%	13.82	151 / 183
skin	72%	4282.15	1306 / 1809	88%	26.75	416 / 472
adrenal gland	100%	13421.81	257 / 258	54%	34.29	124 / 230
intestine	73%	2439.43	710 / 966	78%	13.77	410 / 527
thymus	66%	1492.63	429 / 653	68%	15.99	413 / 605
lymph node	0%	0	0 / 0	100%	197.07	29 / 29
peripheral blood	100%	42113.65	929 / 929	0%	0	0 / 0
spleen	100%	15836.04	241 / 241	0%	0	0 / 0
pancreas	6%	92.93	19 / 328	90%	24.85	160 / 178
tonsil	0%	0	0 / 0	96%	46.51	43 / 45
prostate	30%	566.65	74 / 245	65%	7.29	327 / 502
kidney	9%	168.88	8 / 89	85%	17.48	764 / 901
adipose	93%	4695.34	1124 / 1204	0%	0	0 / 0
ovary	7%	146.37	13 / 180	83%	13.95	359 / 430
blood vessel	68%	1753.12	906 / 1335	0%	0	0 / 0
liver	4%	59.33	9 / 226	52%	7.62	213 / 406
heart	56%	1175.97	479 / 861	0%	0	0 / 0
brain	1%	18.00	28 / 2642	38%	5.69	268 / 705
eye	0%	0	0 / 0	39%	4.82	31 / 80
muscle	37%	705.55	300 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1