Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 14 studies | 55% ± 21% | |
lung | 8 studies | 36% ± 14% | |
eye | 8 studies | 48% ± 21% | |
peripheral blood | 5 studies | 36% ± 13% | |
heart | 5 studies | 45% ± 12% | |
intestine | 5 studies | 20% ± 3% | |
liver | 4 studies | 37% ± 21% | |
adipose | 3 studies | 50% ± 14% | |
kidney | 3 studies | 48% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4431.79 | 1445 / 1445 | 100% | 12.48 | 183 / 183 |
stomach | 100% | 3179.84 | 359 / 359 | 100% | 9.11 | 285 / 286 |
breast | 100% | 4706.78 | 459 / 459 | 100% | 10.78 | 1113 / 1118 |
ovary | 100% | 5607.64 | 180 / 180 | 100% | 7.93 | 428 / 430 |
lung | 100% | 4149.63 | 578 / 578 | 99% | 9.76 | 1149 / 1155 |
intestine | 100% | 4386.10 | 966 / 966 | 99% | 7.82 | 524 / 527 |
bladder | 100% | 4647.19 | 21 / 21 | 99% | 8.17 | 500 / 504 |
thymus | 100% | 5282.38 | 653 / 653 | 99% | 10.22 | 600 / 605 |
brain | 99% | 3077.47 | 2613 / 2642 | 100% | 10.07 | 705 / 705 |
pancreas | 100% | 3032.22 | 328 / 328 | 99% | 8.32 | 176 / 178 |
prostate | 100% | 4325.41 | 245 / 245 | 99% | 8.13 | 495 / 502 |
uterus | 100% | 5763.95 | 170 / 170 | 98% | 8.44 | 452 / 459 |
skin | 100% | 5161.81 | 1809 / 1809 | 98% | 8.19 | 461 / 472 |
kidney | 100% | 2737.87 | 89 / 89 | 98% | 7.80 | 880 / 901 |
adrenal gland | 100% | 3501.71 | 258 / 258 | 93% | 5.46 | 214 / 230 |
liver | 100% | 1733.06 | 226 / 226 | 77% | 3.73 | 313 / 406 |
adipose | 100% | 4181.72 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 4166.05 | 1335 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 2905.81 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4715.90 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.41 | 1 / 1 |
heart | 99% | 2013.01 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 3054.37 | 905 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 5.95 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 96% | 7.92 | 43 / 45 |
eye | 0% | 0 | 0 / 0 | 91% | 5.67 | 73 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006325 | Biological process | chromatin organization |
GO_0045893 | Biological process | positive regulation of DNA-templated transcription |
GO_1903108 | Biological process | regulation of mitochondrial transcription |
GO_0000776 | Cellular component | kinetochore |
GO_0005654 | Cellular component | nucleoplasm |
GO_0044545 | Cellular component | NSL complex |
GO_0071339 | Cellular component | MLL1 complex |
GO_0000123 | Cellular component | histone acetyltransferase complex |
GO_0005739 | Cellular component | mitochondrion |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0035035 | Molecular function | histone acetyltransferase binding |
Gene name | KANSL1 |
Protein name | KAT8 regulatory NSL complex subunit 1 (MLL1/MLL complex subunit KANSL1) (MSL1 homolog 1) (hMSL1v1) (NSL complex protein NSL1) (Non-specific lethal 1 homolog) KAT8 regulatory NSL complex subunit 1 |
Synonyms | NSL1 CENP-36 KIAA1267 MSL1V1 |
Description | FUNCTION: As part of the NSL complex it is involved in acetylation of nucleosomal histone H4 on several lysine residues and therefore may be involved in the regulation of transcription. . |
Accessions | ENST00000611596.1 A0A0G2JNT7 ENST00000572904.6 [Q7Z3B3-1] ENST00000627698.2 ENST00000574590.6 ENST00000610328.2 A0A0G2JQF5 ENST00000639150.1 ENST00000626533.2 ENST00000632215.1 I3L243 ENST00000633448.1 A0A1W2PRA9 ENST00000613150.3 ENST00000630200.2 ENST00000432791.7 [Q7Z3B3-1] A0A1W2PPV8 A0A1W2PRB5 ENST00000639467.1 A0A3B3IT55 ENST00000262419.10 [Q7Z3B3-1] ENST00000638275.1 ENST00000633346.1 A0A1W2PRR3 ENST00000629551.2 ENST00000633819.1 ENST00000622036.4 ENST00000639853.1 ENST00000639531.1 A0A0G2JNB1 A0A1W2PS83 ENST00000629079.1 ENST00000576739.2 Q7Z3B3 ENST00000633540.1 A0A0G2JQP8 ENST00000648792.1 ENST00000575318.6 ENST00000640636.1 ENST00000628726.1 A0A0G2JQF4 A0A1W2PQT4 I3L233 A0A0J9YVS1 A0A9S7M8F4 ENST00000571698.2 ENST00000626557.2 A0A0G2JRW7 |