Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 27 studies | 39% ± 20% | |
endothelial cell | 26 studies | 32% ± 13% | |
fibroblast | 21 studies | 30% ± 9% | |
smooth muscle cell | 19 studies | 27% ± 11% | |
macrophage | 18 studies | 31% ± 16% | |
plasmacytoid dendritic cell | 17 studies | 44% ± 15% | |
endothelial cell of lymphatic vessel | 16 studies | 30% ± 10% | |
type I pneumocyte | 11 studies | 44% ± 17% | |
endothelial cell of artery | 10 studies | 32% ± 14% | |
capillary endothelial cell | 9 studies | 32% ± 13% | |
mesothelial cell | 9 studies | 42% ± 19% | |
microglial cell | 9 studies | 31% ± 9% | |
myofibroblast cell | 8 studies | 37% ± 13% | |
ciliated cell | 8 studies | 29% ± 10% | |
connective tissue cell | 7 studies | 25% ± 9% | |
amacrine cell | 7 studies | 29% ± 10% | |
vein endothelial cell | 7 studies | 28% ± 14% | |
endothelial cell of vascular tree | 7 studies | 30% ± 10% | |
plasma cell | 6 studies | 32% ± 10% | |
retina horizontal cell | 6 studies | 48% ± 12% | |
basal cell | 6 studies | 25% ± 6% | |
epithelial cell | 5 studies | 31% ± 6% | |
myeloid cell | 5 studies | 27% ± 9% | |
ionocyte | 4 studies | 27% ± 10% | |
conventional dendritic cell | 4 studies | 30% ± 8% | |
glomerular endothelial cell | 4 studies | 64% ± 1% | |
renal alpha-intercalated cell | 4 studies | 37% ± 13% | |
retinal ganglion cell | 4 studies | 58% ± 29% | |
cardiac muscle cell | 4 studies | 16% ± 1% | |
myoepithelial cell | 4 studies | 48% ± 15% | |
GABAergic neuron | 4 studies | 41% ± 13% | |
dendritic cell | 4 studies | 30% ± 15% | |
intestinal crypt stem cell | 4 studies | 26% ± 5% | |
IgG plasma cell | 3 studies | 24% ± 4% | |
muscle cell | 3 studies | 32% ± 13% | |
astrocyte | 3 studies | 21% ± 3% | |
glutamatergic neuron | 3 studies | 52% ± 9% | |
secretory cell | 3 studies | 66% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 15407.81 | 652 / 653 | 100% | 199.13 | 605 / 605 |
ovary | 100% | 15253.04 | 180 / 180 | 99% | 133.62 | 425 / 430 |
prostate | 100% | 16475.49 | 245 / 245 | 98% | 45.59 | 491 / 502 |
intestine | 98% | 8478.32 | 951 / 966 | 96% | 62.09 | 504 / 527 |
stomach | 99% | 7706.72 | 356 / 359 | 94% | 51.50 | 269 / 286 |
lung | 99% | 13506.06 | 575 / 578 | 92% | 43.97 | 1063 / 1155 |
kidney | 99% | 9435.70 | 88 / 89 | 92% | 56.06 | 833 / 901 |
esophagus | 99% | 16900.94 | 1433 / 1445 | 92% | 39.63 | 168 / 183 |
breast | 99% | 10973.14 | 456 / 459 | 91% | 47.65 | 1019 / 1118 |
uterus | 100% | 25090.75 | 170 / 170 | 88% | 65.09 | 406 / 459 |
pancreas | 84% | 4301.75 | 274 / 328 | 96% | 82.75 | 170 / 178 |
bladder | 100% | 19235.81 | 21 / 21 | 78% | 48.67 | 392 / 504 |
adrenal gland | 76% | 3937.17 | 195 / 258 | 87% | 64.31 | 199 / 230 |
skin | 100% | 27719.76 | 1808 / 1809 | 62% | 19.96 | 292 / 472 |
brain | 65% | 2827.81 | 1721 / 2642 | 93% | 25.83 | 653 / 705 |
liver | 60% | 2792.50 | 135 / 226 | 68% | 23.45 | 278 / 406 |
blood vessel | 100% | 49904.95 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 100% | 13591.13 | 859 / 861 | 0% | 0 | 0 / 0 |
adipose | 100% | 14735.99 | 1198 / 1204 | 0% | 0 | 0 / 0 |
muscle | 97% | 7236.76 | 776 / 803 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 89% | 39.98 | 40 / 45 |
spleen | 83% | 4287.92 | 199 / 241 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 73% | 20.74 | 58 / 80 |
lymph node | 0% | 0 | 0 / 0 | 45% | 8.70 | 13 / 29 |
peripheral blood | 1% | 19.78 | 5 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0043154 | Biological process | negative regulation of cysteine-type endopeptidase activity involved in apoptotic process |
GO_1900142 | Biological process | negative regulation of oligodendrocyte apoptotic process |
GO_0031589 | Biological process | cell-substrate adhesion |
GO_0071333 | Biological process | cellular response to glucose stimulus |
GO_0050766 | Biological process | positive regulation of phagocytosis |
GO_2000352 | Biological process | negative regulation of endothelial cell apoptotic process |
GO_0071466 | Biological process | cellular response to xenobiotic stimulus |
GO_0035457 | Biological process | cellular response to interferon-alpha |
GO_0072659 | Biological process | protein localization to plasma membrane |
GO_0071307 | Biological process | cellular response to vitamin K |
GO_0032148 | Biological process | activation of protein kinase B activity |
GO_0048146 | Biological process | positive regulation of fibroblast proliferation |
GO_2000270 | Biological process | negative regulation of fibroblast apoptotic process |
GO_0032692 | Biological process | negative regulation of interleukin-1 production |
GO_0033028 | Biological process | myeloid cell apoptotic process |
GO_0085029 | Biological process | extracellular matrix assembly |
GO_0032715 | Biological process | negative regulation of interleukin-6 production |
GO_0003104 | Biological process | positive regulation of glomerular filtration |
GO_0007165 | Biological process | signal transduction |
GO_0007167 | Biological process | enzyme-linked receptor protein signaling pathway |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0001961 | Biological process | positive regulation of cytokine-mediated signaling pathway |
GO_0046827 | Biological process | positive regulation of protein export from nucleus |
GO_0001764 | Biological process | neuron migration |
GO_0031100 | Biological process | animal organ regeneration |
GO_0001934 | Biological process | positive regulation of protein phosphorylation |
GO_0007596 | Biological process | blood coagulation |
GO_0097028 | Biological process | dendritic cell differentiation |
GO_0009267 | Biological process | cellular response to starvation |
GO_0071363 | Biological process | cellular response to growth factor stimulus |
GO_0033033 | Biological process | negative regulation of myeloid cell apoptotic process |
GO_0035754 | Biological process | B cell chemotaxis |
GO_0045860 | Biological process | positive regulation of protein kinase activity |
GO_0046813 | Biological process | receptor-mediated virion attachment to host cell |
GO_0070168 | Biological process | negative regulation of biomineral tissue development |
GO_2000510 | Biological process | positive regulation of dendritic cell chemotaxis |
GO_0046718 | Biological process | symbiont entry into host cell |
GO_0043277 | Biological process | apoptotic cell clearance |
GO_0032825 | Biological process | positive regulation of natural killer cell differentiation |
GO_0019064 | Biological process | fusion of virus membrane with host plasma membrane |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0097241 | Biological process | hematopoietic stem cell migration to bone marrow |
GO_0006909 | Biological process | phagocytosis |
GO_0032689 | Biological process | negative regulation of type II interferon production |
GO_0051897 | Biological process | positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction |
GO_0006468 | Biological process | protein phosphorylation |
GO_0032720 | Biological process | negative regulation of tumor necrosis factor production |
GO_0044346 | Biological process | fibroblast apoptotic process |
GO_0010804 | Biological process | negative regulation of tumor necrosis factor-mediated signaling pathway |
GO_0070374 | Biological process | positive regulation of ERK1 and ERK2 cascade |
GO_0019079 | Biological process | viral genome replication |
GO_2000669 | Biological process | negative regulation of dendritic cell apoptotic process |
GO_0032008 | Biological process | positive regulation of TOR signaling |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0070588 | Biological process | calcium ion transmembrane transport |
GO_2000533 | Biological process | negative regulation of renal albumin absorption |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0005796 | Cellular component | Golgi lumen |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0031093 | Cellular component | platelet alpha granule lumen |
GO_0005737 | Cellular component | cytoplasm |
GO_0043027 | Molecular function | cysteine-type endopeptidase inhibitor activity involved in apoptotic process |
GO_0048018 | Molecular function | receptor ligand activity |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0001786 | Molecular function | phosphatidylserine binding |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
GO_0030971 | Molecular function | receptor tyrosine kinase binding |
Gene name | GAS6 |
Protein name | Growth arrest-specific protein 6 Growth arrest-specific protein 6 (GAS-6) (AXL receptor tyrosine kinase ligand) |
Synonyms | AXLLG |
Description | FUNCTION: Ligand for tyrosine-protein kinase receptors AXL, TYRO3 and MER whose signaling is implicated in cell growth and survival, cell adhesion and cell migration. GAS6/AXL signaling plays a role in various processes such as endothelial cell survival during acidification by preventing apoptosis, optimal cytokine signaling during human natural killer cell development, hepatic regeneration, gonadotropin-releasing hormone neuron survival and migration, platelet activation, or regulation of thrombotic responses. .; FUNCTION: (Microbial infection) Can bridge virus envelope phosphatidylserine to the TAM receptor tyrosine kinase Axl to mediate viral entry by apoptotic mimicry . Plays a role in Dengue cell entry by apoptotic mimicry . Plays a role in Vaccinia virus cell entry by apoptotic mimicry . Plays a role in ebolavirus and marburgvirus cell entry by apoptotic mimicry . . |
Accessions | Q14393 A0A0F6PYS3 ENST00000327773.7 [Q14393-2] |