Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 13 studies | 25% ± 10% | |
brain | 9 studies | 29% ± 16% | |
lung | 8 studies | 23% ± 6% | |
bone marrow | 4 studies | 16% ± 1% | |
pancreas | 3 studies | 27% ± 3% | |
eye | 3 studies | 24% ± 4% | |
uterus | 3 studies | 27% ± 12% | |
intestine | 3 studies | 23% ± 8% | |
liver | 3 studies | 25% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2042.14 | 1445 / 1445 | 100% | 4.87 | 183 / 183 |
brain | 100% | 2270.96 | 2641 / 2642 | 100% | 7.40 | 705 / 705 |
lung | 100% | 2020.13 | 578 / 578 | 100% | 6.54 | 1154 / 1155 |
breast | 100% | 2556.69 | 459 / 459 | 100% | 9.51 | 1117 / 1118 |
prostate | 100% | 2140.95 | 245 / 245 | 100% | 7.22 | 501 / 502 |
uterus | 100% | 2654.98 | 170 / 170 | 100% | 6.73 | 458 / 459 |
ovary | 100% | 2267.39 | 180 / 180 | 100% | 5.97 | 429 / 430 |
thymus | 100% | 2128.06 | 653 / 653 | 100% | 7.98 | 603 / 605 |
pancreas | 100% | 1161.90 | 328 / 328 | 99% | 6.16 | 176 / 178 |
bladder | 100% | 2278.29 | 21 / 21 | 99% | 6.34 | 498 / 504 |
kidney | 100% | 1794.19 | 89 / 89 | 97% | 6.70 | 874 / 901 |
stomach | 100% | 1571.50 | 359 / 359 | 97% | 5.41 | 277 / 286 |
adrenal gland | 100% | 1504.34 | 258 / 258 | 97% | 6.25 | 222 / 230 |
intestine | 100% | 2287.89 | 966 / 966 | 96% | 5.99 | 506 / 527 |
liver | 100% | 880.96 | 226 / 226 | 92% | 3.78 | 374 / 406 |
skin | 100% | 1997.62 | 1808 / 1809 | 89% | 5.04 | 422 / 472 |
adipose | 100% | 2519.59 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2453.28 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 7.07 | 29 / 29 |
muscle | 100% | 2265.44 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2036.52 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 2.80 | 1 / 1 |
heart | 98% | 1467.12 | 848 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 98% | 5.69 | 44 / 45 |
peripheral blood | 81% | 938.27 | 753 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 69% | 3.59 | 55 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM204A |
Protein name | Protein FAM204A Family with sequence similarity 204 member A |
Synonyms | C10orf84 |
Description | |
Accessions | ENST00000369172.8 F2Z2Y3 ENST00000369183.9 ENST00000369170.4 Q5T374 ENST00000470476.5 Q9H8W3 |