Name | Number of supported studies | Average coverage | |
---|---|---|---|
macrophage | 39 studies | 48% ± 19% | |
B cell | 35 studies | 34% ± 12% | |
dendritic cell | 27 studies | 56% ± 22% | |
conventional dendritic cell | 27 studies | 62% ± 15% | |
classical monocyte | 26 studies | 49% ± 16% | |
monocyte | 22 studies | 42% ± 17% | |
non-classical monocyte | 22 studies | 45% ± 16% | |
memory B cell | 20 studies | 40% ± 10% | |
endothelial cell of lymphatic vessel | 19 studies | 37% ± 13% | |
endothelial cell | 18 studies | 33% ± 17% | |
ciliated cell | 17 studies | 50% ± 17% | |
naive B cell | 17 studies | 26% ± 10% | |
plasma cell | 15 studies | 43% ± 20% | |
basal cell | 15 studies | 37% ± 20% | |
epithelial cell | 14 studies | 46% ± 20% | |
myeloid cell | 14 studies | 46% ± 20% | |
type II pneumocyte | 12 studies | 79% ± 18% | |
type I pneumocyte | 10 studies | 38% ± 14% | |
club cell | 10 studies | 29% ± 17% | |
plasmablast | 9 studies | 42% ± 18% | |
endothelial cell of artery | 9 studies | 26% ± 8% | |
vein endothelial cell | 9 studies | 27% ± 11% | |
epithelial cell of proximal tubule | 8 studies | 32% ± 10% | |
leukocyte | 8 studies | 35% ± 20% | |
alveolar macrophage | 7 studies | 46% ± 14% | |
secretory cell | 7 studies | 39% ± 18% | |
microglial cell | 7 studies | 33% ± 17% | |
fibroblast | 7 studies | 33% ± 14% | |
plasmacytoid dendritic cell | 7 studies | 28% ± 10% | |
respiratory goblet cell | 6 studies | 29% ± 17% | |
mononuclear phagocyte | 6 studies | 49% ± 17% | |
capillary endothelial cell | 6 studies | 29% ± 8% | |
endothelial cell of vascular tree | 6 studies | 31% ± 11% | |
abnormal cell | 5 studies | 29% ± 15% | |
intermediate monocyte | 5 studies | 58% ± 12% | |
monocyte-derived dendritic cell | 4 studies | 56% ± 26% | |
regulatory T cell | 4 studies | 28% ± 9% | |
astrocyte | 4 studies | 24% ± 6% | |
Langerhans cell | 3 studies | 58% ± 27% | |
mesothelial cell | 3 studies | 28% ± 15% | |
innate lymphoid cell | 3 studies | 30% ± 8% | |
enterocyte | 3 studies | 22% ± 6% | |
serous secreting cell | 3 studies | 21% ± 0% | |
tissue-resident macrophage | 3 studies | 40% ± 16% | |
germinal center B cell | 3 studies | 53% ± 9% | |
inflammatory macrophage | 3 studies | 38% ± 23% | |
pancreatic ductal cell | 3 studies | 62% ± 8% | |
CD4-positive, alpha-beta T cell | 3 studies | 46% ± 22% | |
hepatocyte | 3 studies | 29% ± 12% | |
T-helper 17 cell | 3 studies | 35% ± 25% | |
neutrophil | 3 studies | 32% ± 10% | |
mucosal invariant T cell | 3 studies | 18% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 100% | 7139.18 | 245 / 245 | 99% | 41.01 | 498 / 502 |
lung | 100% | 23840.95 | 578 / 578 | 97% | 91.66 | 1123 / 1155 |
stomach | 100% | 4803.60 | 359 / 359 | 97% | 43.00 | 277 / 286 |
kidney | 100% | 17162.91 | 89 / 89 | 96% | 41.41 | 869 / 901 |
bladder | 100% | 7561.24 | 21 / 21 | 96% | 87.70 | 486 / 504 |
breast | 100% | 5802.89 | 458 / 459 | 96% | 33.36 | 1071 / 1118 |
intestine | 100% | 3724.81 | 963 / 966 | 96% | 39.48 | 504 / 527 |
pancreas | 100% | 2851.93 | 327 / 328 | 94% | 61.52 | 168 / 178 |
uterus | 100% | 4484.25 | 170 / 170 | 92% | 46.40 | 422 / 459 |
liver | 100% | 3599.61 | 225 / 226 | 91% | 43.30 | 370 / 406 |
thymus | 100% | 3461.12 | 651 / 653 | 91% | 92.05 | 550 / 605 |
esophagus | 99% | 2543.42 | 1435 / 1445 | 75% | 24.73 | 138 / 183 |
ovary | 100% | 4782.37 | 180 / 180 | 70% | 14.92 | 303 / 430 |
skin | 73% | 3620.52 | 1327 / 1809 | 87% | 35.64 | 412 / 472 |
brain | 88% | 2038.68 | 2332 / 2642 | 68% | 26.36 | 478 / 705 |
adrenal gland | 100% | 3955.38 | 258 / 258 | 16% | 3.05 | 36 / 230 |
lymph node | 0% | 0 | 0 / 0 | 100% | 169.28 | 29 / 29 |
spleen | 100% | 7008.32 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 55.35 | 1 / 1 |
adipose | 100% | 5374.21 | 1203 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 10267.69 | 922 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 2469.30 | 853 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 28.90 | 42 / 45 |
blood vessel | 82% | 2178.91 | 1095 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 70% | 16.65 | 56 / 80 |
muscle | 45% | 515.47 | 361 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010813 | Biological process | neuropeptide catabolic process |
GO_0010815 | Biological process | bradykinin catabolic process |
GO_0045766 | Biological process | positive regulation of angiogenesis |
GO_0033619 | Biological process | membrane protein proteolysis |
GO_0001656 | Biological process | metanephros development |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0097067 | Biological process | cellular response to thyroid hormone stimulus |
GO_0001913 | Biological process | T cell mediated cytotoxicity |
GO_0060448 | Biological process | dichotomous subdivision of terminal units involved in lung branching |
GO_0031648 | Biological process | protein destabilization |
GO_0031638 | Biological process | zymogen activation |
GO_0006955 | Biological process | immune response |
GO_0002250 | Biological process | adaptive immune response |
GO_0070371 | Biological process | ERK1 and ERK2 cascade |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0030335 | Biological process | positive regulation of cell migration |
GO_0006508 | Biological process | proteolysis |
GO_0010952 | Biological process | positive regulation of peptidase activity |
GO_0043129 | Biological process | surfactant homeostasis |
GO_0002764 | Biological process | immune response-regulating signaling pathway |
GO_0006915 | Biological process | apoptotic process |
GO_0019882 | Biological process | antigen processing and presentation |
GO_0008284 | Biological process | positive regulation of cell population proliferation |
GO_0032526 | Biological process | response to retinoic acid |
GO_0051603 | Biological process | proteolysis involved in protein catabolic process |
GO_2001235 | Biological process | positive regulation of apoptotic signaling pathway |
GO_0010634 | Biological process | positive regulation of epithelial cell migration |
GO_0097486 | Cellular component | multivesicular body lumen |
GO_0005615 | Cellular component | extracellular space |
GO_0005576 | Cellular component | extracellular region |
GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
GO_0005764 | Cellular component | lysosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0097208 | Cellular component | alveolar lamellar body |
GO_1904724 | Cellular component | tertiary granule lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005829 | Cellular component | cytosol |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0008233 | Molecular function | peptidase activity |
GO_0004175 | Molecular function | endopeptidase activity |
GO_0008656 | Molecular function | cysteine-type endopeptidase activator activity involved in apoptotic process |
GO_0030108 | Molecular function | HLA-A specific activating MHC class I receptor activity |
GO_0004177 | Molecular function | aminopeptidase activity |
GO_0008234 | Molecular function | cysteine-type peptidase activity |
GO_0004197 | Molecular function | cysteine-type endopeptidase activity |
GO_0005515 | Molecular function | protein binding |
GO_0004252 | Molecular function | serine-type endopeptidase activity |
GO_0070324 | Molecular function | thyroid hormone binding |
Gene name | CTSH |
Protein name | Pro-cathepsin H [Cleaved into: Cathepsin H mini chain; Cathepsin H (EC 3.4.22.16); Cathepsin H heavy chain; Cathepsin H light chain] Cathepsin H Pro-cathepsin H |
Synonyms | CPSB |
Description | FUNCTION: Important for the overall degradation of proteins in lysosomes. FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . FUNCTION: Important for the overall degradation of proteins in lysosomes. . |
Accessions | ENST00000676510.1 ENST00000529861.6 ENST00000615999.5 A0A7I2V2E4 A0A7I2YQ92 ENST00000676763.1 ENST00000679172.1 A0A7I2V673 A0A7I2V3T9 A0A7I2V439 E9PN60 ENST00000677810.1 ENST00000679017.1 A0A3B3IRM7 ENST00000528741.6 A0A7I2YQL1 P09668 ENST00000677011.1 E9PKT6 A0A7I2YQL6 A0A7I2V4N9 ENST00000677936.1 A0A7I2YQX6 ENST00000676880.1 A0A7I2YQH4 A0A7I2V563 ENST00000678799.1 ENST00000678415.1 ENST00000678727.1 ENST00000649928.2 ENST00000528191.6 ENST00000678283.1 ENST00000678487.1 ENST00000677789.1 A0A7I2YQE6 Q6IBC3 ENST00000676808.1 ENST00000678644.1 A0A7I2V314 E9PN84 ENST00000678281.1 ENST00000677921.1 ENST00000677534.1 A0A087X0D5 ENST00000676850.1 A0A7I2V4X5 ENST00000678886.1 A0A7I2V4W0 ENST00000677207.1 A0A7I2V2T8 ENST00000678031.1 ENST00000676639.1 A0A7I2V532 ENST00000677316.1 ENST00000220166.10 ENST00000679211.1 ENST00000679334.1 A0A0B4J217 ENST00000533777.5 ENST00000677320.1 A0A7I2V2L7 ENST00000679047.1 ENST00000525807.6 ENST00000677874.1 A0A7I2V3E8 ENST00000676596.1 A0A7I2V4H2 |