Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 299.96 | 576 / 578 | 92% | 36.58 | 1061 / 1155 |
stomach | 86% | 131.88 | 308 / 359 | 83% | 28.44 | 237 / 286 |
prostate | 86% | 100.56 | 210 / 245 | 67% | 14.03 | 335 / 502 |
thymus | 87% | 132.96 | 567 / 653 | 63% | 288.44 | 384 / 605 |
intestine | 65% | 305.59 | 624 / 966 | 83% | 24.25 | 438 / 527 |
breast | 71% | 72.01 | 327 / 459 | 74% | 29.59 | 827 / 1118 |
uterus | 61% | 38.29 | 103 / 170 | 77% | 36.43 | 352 / 459 |
bladder | 57% | 118.67 | 12 / 21 | 72% | 23.99 | 364 / 504 |
kidney | 55% | 72.69 | 49 / 89 | 73% | 31.42 | 662 / 901 |
liver | 60% | 38.19 | 136 / 226 | 57% | 19.73 | 231 / 406 |
esophagus | 49% | 54.96 | 708 / 1445 | 68% | 17.46 | 124 / 183 |
skin | 40% | 26.72 | 728 / 1809 | 69% | 46.22 | 325 / 472 |
pancreas | 21% | 11.07 | 68 / 328 | 82% | 31.35 | 146 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 319.00 | 29 / 29 |
spleen | 100% | 1336.78 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 93% | 78.66 | 42 / 45 |
peripheral blood | 84% | 1041.39 | 784 / 929 | 0% | 0 | 0 / 0 |
adipose | 83% | 91.90 | 1001 / 1204 | 0% | 0 | 0 / 0 |
ovary | 19% | 13.26 | 35 / 180 | 41% | 6.78 | 175 / 430 |
adrenal gland | 36% | 20.38 | 93 / 258 | 14% | 2.15 | 33 / 230 |
blood vessel | 42% | 43.85 | 556 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 23% | 9.44 | 18 / 80 |
heart | 17% | 10.47 | 149 / 861 | 0% | 0 | 0 / 0 |
brain | 6% | 3.44 | 159 / 2642 | 11% | 1.81 | 75 / 705 |
muscle | 6% | 2.58 | 48 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0002250 | Biological process | adaptive immune response |
GO_0045059 | Biological process | positive thymic T cell selection |
GO_0046631 | Biological process | alpha-beta T cell activation |
GO_0050852 | Biological process | T cell receptor signaling pathway |
GO_0007166 | Biological process | cell surface receptor signaling pathway |
GO_0042105 | Cellular component | alpha-beta T cell receptor complex |
GO_0042101 | Cellular component | T cell receptor complex |
GO_0009897 | Cellular component | external side of plasma membrane |
GO_0030669 | Cellular component | clathrin-coated endocytic vesicle membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0004888 | Molecular function | transmembrane signaling receptor activity |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CD3D |
Protein name | T-cell surface glycoprotein CD3 delta chain (T-cell receptor T3 delta chain) (CD antigen CD3d) CD3 delta T-cell surface glycoprotein CD3 delta chain (T-cell receptor T3 delta chain) |
Synonyms | T3D hCG_40222 |
Description | FUNCTION: Part of the TCR-CD3 complex present on T-lymphocyte cell surface that plays an essential role in adaptive immune response. When antigen presenting cells (APCs) activate T-cell receptor (TCR), TCR-mediated signals are transmitted across the cell membrane by the CD3 chains CD3D, CD3E, CD3G and CD3Z. All CD3 chains contain immunoreceptor tyrosine-based activation motifs (ITAMs) in their cytoplasmic domain. Upon TCR engagement, these motifs become phosphorylated by Src family protein tyrosine kinases LCK and FYN, resulting in the activation of downstream signaling pathways . In addition of this role of signal transduction in T-cell activation, CD3D plays an essential role in thymocyte differentiation. Indeed, participates in correct intracellular TCR-CD3 complex assembly and surface expression. In absence of a functional TCR-CD3 complex, thymocytes are unable to differentiate properly. Interacts with CD4 and CD8 and thus serves to establish a functional link between the TCR and coreceptors CD4 and CD8, which is needed for activation and positive selection of CD4 or CD8 T-cells. . |
Accessions | B0YIY4 ENST00000392884.2 [P04234-2] E9PMT5 P04234 G8H453 ENST00000300692.9 [P04234-1] ENST00000529594.5 |