Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 15 studies | 26% ± 10% | |
peripheral blood | 15 studies | 25% ± 8% | |
kidney | 6 studies | 19% ± 4% | |
eye | 6 studies | 23% ± 8% | |
brain | 6 studies | 28% ± 12% | |
intestine | 5 studies | 21% ± 7% | |
pancreas | 3 studies | 39% ± 15% | |
bone marrow | 3 studies | 19% ± 4% | |
liver | 3 studies | 31% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 5334.92 | 1445 / 1445 | 100% | 33.00 | 183 / 183 |
lung | 100% | 6781.73 | 578 / 578 | 100% | 43.86 | 1155 / 1155 |
thymus | 100% | 6220.50 | 653 / 653 | 100% | 53.06 | 603 / 605 |
stomach | 100% | 4330.59 | 359 / 359 | 100% | 41.27 | 285 / 286 |
prostate | 100% | 5285.15 | 245 / 245 | 100% | 47.31 | 500 / 502 |
skin | 100% | 5778.87 | 1809 / 1809 | 100% | 60.19 | 470 / 472 |
brain | 99% | 6846.05 | 2628 / 2642 | 100% | 60.15 | 705 / 705 |
intestine | 100% | 6435.49 | 966 / 966 | 99% | 46.38 | 524 / 527 |
kidney | 100% | 6095.37 | 89 / 89 | 99% | 41.80 | 895 / 901 |
ovary | 99% | 2762.23 | 179 / 180 | 100% | 30.78 | 429 / 430 |
uterus | 100% | 4882.75 | 170 / 170 | 99% | 44.34 | 455 / 459 |
breast | 100% | 4256.22 | 459 / 459 | 99% | 41.40 | 1105 / 1118 |
liver | 100% | 3106.37 | 225 / 226 | 99% | 30.43 | 403 / 406 |
bladder | 100% | 4608.71 | 21 / 21 | 98% | 44.45 | 496 / 504 |
adrenal gland | 100% | 8479.87 | 258 / 258 | 98% | 65.29 | 225 / 230 |
pancreas | 97% | 2276.04 | 318 / 328 | 100% | 46.53 | 178 / 178 |
adipose | 100% | 4113.66 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 53.99 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 74.58 | 29 / 29 |
spleen | 100% | 7747.45 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 42.07 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 20.62 | 1 / 1 |
peripheral blood | 100% | 14056.32 | 928 / 929 | 0% | 0 | 0 / 0 |
muscle | 100% | 5675.49 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3920.41 | 1331 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 3410.76 | 831 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0060271 | Biological process | cilium assembly |
GO_0097401 | Biological process | synaptic vesicle lumen acidification |
GO_0036295 | Biological process | cellular response to increased oxygen levels |
GO_0006879 | Biological process | intracellular iron ion homeostasis |
GO_0007035 | Biological process | vacuolar acidification |
GO_0016241 | Biological process | regulation of macroautophagy |
GO_0007034 | Biological process | vacuolar transport |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0016020 | Cellular component | membrane |
GO_0005769 | Cellular component | early endosome |
GO_0005813 | Cellular component | centrosome |
GO_1902495 | Cellular component | transmembrane transporter complex |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0070062 | Cellular component | extracellular exosome |
GO_0043679 | Cellular component | axon terminus |
GO_0030670 | Cellular component | phagocytic vesicle membrane |
GO_0000220 | Cellular component | vacuolar proton-transporting V-type ATPase, V0 domain |
GO_0010008 | Cellular component | endosome membrane |
GO_0016471 | Cellular component | vacuolar proton-transporting V-type ATPase complex |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0033181 | Cellular component | plasma membrane proton-transporting V-type ATPase complex |
GO_0030665 | Cellular component | clathrin-coated vesicle membrane |
GO_0046961 | Molecular function | proton-transporting ATPase activity, rotational mechanism |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0005515 | Molecular function | protein binding |
Gene name | ATP6V0D1 |
Protein name | V-type proton ATPase subunit ATPase H+ transporting V0 subunit D1 V-type proton ATPase subunit d 1 (V-ATPase subunit d 1) (32 kDa accessory protein) (V-ATPase 40 kDa accessory protein) (V-ATPase AC39 subunit) (p39) (Vacuolar proton pump subunit d 1) ATPase H+ transporting V0 subunit d1 |
Synonyms | VPATPD ATP6D |
Description | FUNCTION: Subunit of the V0 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons . V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment . May play a role in coupling of proton transport and ATP hydrolysis (By similarity). In aerobic conditions, involved in intracellular iron homeostasis, thus triggering the activity of Fe(2+) prolyl hydroxylase (PHD) enzymes, and leading to HIF1A hydroxylation and subsequent proteasomal degradation . May play a role in cilium biogenesis through regulation of the transport and the localization of proteins to the cilium (By similarity). . FUNCTION: Subunit of the V0 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons. V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment. . |
Accessions | H3BUQ0 H3BQJ1 H3BTB4 ENST00000568101.5 H3BTB5 F8WEN9 ENST00000564615.5 J3QL14 F5GYQ1 P61421 ENST00000290949.8 ENST00000561852.5 H3BSG7 ENST00000426604.7 ENST00000565835.5 ENST00000564191.5 C6SUN6 ENST00000563064.5 ENST00000540149.5 ENST00000566322.6 H3BQB4 ENST00000564788.1 H3BPS0 |