SUGT1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	24 studies	25% ± 10%	Explore
natural killer cell	16 studies	20% ± 4%	Explore
fibroblast	14 studies	23% ± 9%	Explore
ciliated cell	14 studies	32% ± 13%	Explore
regulatory T cell	11 studies	20% ± 3%	Explore
smooth muscle cell	10 studies	21% ± 4%	Explore
CD8-positive, alpha-beta T cell	10 studies	20% ± 4%	Explore
macrophage	10 studies	22% ± 9%	Explore
B cell	9 studies	20% ± 5%	Explore
pericyte	9 studies	23% ± 5%	Explore
epithelial cell	9 studies	34% ± 19%	Explore
endothelial cell of lymphatic vessel	8 studies	23% ± 6%	Explore
classical monocyte	8 studies	22% ± 9%	Explore
CD4-positive, alpha-beta T cell	8 studies	21% ± 5%	Explore
astrocyte	8 studies	26% ± 10%	Explore
oligodendrocyte	8 studies	31% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	20% ± 4%	Explore
myofibroblast cell	7 studies	21% ± 6%	Explore
connective tissue cell	7 studies	22% ± 3%	Explore
plasmacytoid dendritic cell	7 studies	24% ± 6%	Explore
non-classical monocyte	6 studies	26% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	6 studies	19% ± 3%	Explore
conventional dendritic cell	6 studies	28% ± 13%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	18% ± 2%	Explore
capillary endothelial cell	6 studies	19% ± 4%	Explore
neuron	6 studies	32% ± 14%	Explore
basal cell	6 studies	27% ± 13%	Explore
memory B cell	6 studies	18% ± 2%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	21% ± 5%	Explore
naive B cell	5 studies	18% ± 4%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	18% ± 1%	Explore
mature NK T cell	5 studies	19% ± 2%	Explore
T cell	5 studies	18% ± 3%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	18% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	19% ± 4%	Explore
innate lymphoid cell	5 studies	18% ± 2%	Explore
GABAergic neuron	5 studies	35% ± 17%	Explore
glutamatergic neuron	5 studies	40% ± 20%	Explore
gamma-delta T cell	5 studies	26% ± 16%	Explore
interneuron	5 studies	34% ± 19%	Explore
oligodendrocyte precursor cell	5 studies	32% ± 14%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	20% ± 4%	Explore
endothelial cell of artery	4 studies	19% ± 2%	Explore
abnormal cell	4 studies	22% ± 3%	Explore
endothelial cell of vascular tree	4 studies	20% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	22% ± 5%	Explore
hematopoietic precursor cell	3 studies	30% ± 11%	Explore
plasmablast	3 studies	55% ± 7%	Explore
pancreatic A cell	3 studies	28% ± 6%	Explore
leukocyte	3 studies	23% ± 3%	Explore
exhausted T cell	3 studies	23% ± 9%	Explore
neural crest cell	3 studies	21% ± 1%	Explore
microglial cell	3 studies	22% ± 7%	Explore
retinal ganglion cell	3 studies	51% ± 21%	Explore
myeloid cell	3 studies	29% ± 9%	Explore
mast cell	3 studies	25% ± 8%	Explore
precursor B cell	3 studies	25% ± 10%	Explore
amacrine cell	3 studies	29% ± 6%	Explore
retinal cone cell	3 studies	27% ± 2%	Explore
retinal rod cell	3 studies	20% ± 2%	Explore
Mueller cell	3 studies	26% ± 6%	Explore
erythroblast	3 studies	30% ± 19%	Explore
hematopoietic stem cell	3 studies	19% ± 1%	Explore
enteroendocrine cell	3 studies	26% ± 8%	Explore
intestinal crypt stem cell	3 studies	20% ± 3%	Explore
mucosal invariant T cell	3 studies	18% ± 2%	Explore
erythrocyte	3 studies	34% ± 22%	Explore
double negative thymocyte	3 studies	30% ± 18%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	8 studies	23% ± 8%	Explore
brain	8 studies	32% ± 14%	Explore
lung	7 studies	27% ± 10%	Explore
eye	4 studies	25% ± 3%	Explore
intestine	4 studies	24% ± 9%	Explore
pancreas	3 studies	28% ± 6%	Explore
liver	3 studies	32% ± 18%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	4234.26	2642 / 2642	100%	14.80	705 / 705
breast	100%	2729.36	459 / 459	100%	12.44	1118 / 1118
esophagus	100%	2662.40	1445 / 1445	100%	12.72	183 / 183
prostate	100%	2463.00	245 / 245	100%	9.25	502 / 502
stomach	100%	2195.96	359 / 359	100%	15.89	286 / 286
thymus	100%	2830.04	653 / 653	100%	12.39	605 / 605
uterus	100%	3263.02	170 / 170	100%	11.70	459 / 459
intestine	100%	2895.80	966 / 966	100%	15.18	526 / 527
bladder	100%	2764.19	21 / 21	100%	11.91	503 / 504
ovary	100%	3217.48	180 / 180	100%	8.26	429 / 430
lung	100%	2494.49	576 / 578	100%	9.91	1155 / 1155
kidney	100%	2609.44	89 / 89	100%	11.37	897 / 901
pancreas	99%	1704.89	326 / 328	100%	11.13	178 / 178
skin	100%	2895.27	1809 / 1809	99%	11.45	469 / 472
liver	100%	1453.76	226 / 226	99%	6.49	403 / 406
adrenal gland	100%	2998.00	258 / 258	98%	11.96	226 / 230
adipose	100%	2705.55	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	12.75	29 / 29
spleen	100%	2469.51	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	8.84	45 / 45
ureter	0%	0	0 / 0	100%	2.75	1 / 1
blood vessel	100%	2826.68	1334 / 1335	0%	0	0 / 0
muscle	100%	2116.58	802 / 803	0%	0	0 / 0
heart	99%	2432.10	851 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	99%	8.71	79 / 80
peripheral blood	80%	1426.12	745 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0014841	Biological process	skeletal muscle satellite cell proliferation
GO_0031647	Biological process	regulation of protein stability
GO_0007051	Biological process	spindle organization
GO_0051382	Biological process	kinetochore assembly
GO_0000776	Cellular component	kinetochore
GO_0000151	Cellular component	ubiquitin ligase complex
GO_0032991	Cellular component	protein-containing complex
GO_0005634	Cellular component	nucleus
GO_0005829	Cellular component	cytosol
GO_0051087	Molecular function	protein-folding chaperone binding
GO_0106222	Molecular function	lncRNA binding
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	SUGT1
Protein name	Protein SGT1 homolog (Protein 40-6-3) (Sgt1) (Suppressor of G2 allele of SKP1 homolog)
Synonyms
Description	FUNCTION: May play a role in ubiquitination and subsequent proteasomal degradation of target proteins.
Accessions	Q9Y2Z0 ENST00000310528.9 [Q9Y2Z0-2] ENST00000343788.10 [Q9Y2Z0-1]

SUGT1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review