PTP4A1 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	18 studies	21% ± 5%	Explore
natural killer cell	17 studies	25% ± 9%	Explore
macrophage	16 studies	23% ± 8%	Explore
epithelial cell	14 studies	44% ± 20%	Explore
basal cell	13 studies	30% ± 6%	Explore
T cell	12 studies	28% ± 11%	Explore
CD4-positive, alpha-beta T cell	12 studies	25% ± 7%	Explore
ciliated cell	12 studies	33% ± 17%	Explore
CD8-positive, alpha-beta T cell	12 studies	23% ± 8%	Explore
regulatory T cell	12 studies	22% ± 8%	Explore
monocyte	11 studies	21% ± 5%	Explore
classical monocyte	11 studies	22% ± 10%	Explore
smooth muscle cell	11 studies	28% ± 8%	Explore
type II pneumocyte	10 studies	41% ± 14%	Explore
fibroblast	10 studies	26% ± 10%	Explore
goblet cell	9 studies	28% ± 9%	Explore
gamma-delta T cell	8 studies	32% ± 11%	Explore
memory B cell	8 studies	22% ± 7%	Explore
type I pneumocyte	7 studies	35% ± 17%	Explore
CD16-negative, CD56-bright natural killer cell, human	7 studies	24% ± 7%	Explore
conventional dendritic cell	7 studies	31% ± 10%	Explore
non-classical monocyte	7 studies	22% ± 9%	Explore
endothelial cell	7 studies	28% ± 15%	Explore
hepatocyte	6 studies	59% ± 26%	Explore
connective tissue cell	6 studies	25% ± 10%	Explore
enterocyte	6 studies	29% ± 7%	Explore
abnormal cell	6 studies	31% ± 20%	Explore
myeloid cell	6 studies	28% ± 12%	Explore
club cell	6 studies	35% ± 20%	Explore
secretory cell	6 studies	23% ± 6%	Explore
pericyte	6 studies	23% ± 9%	Explore
mature NK T cell	5 studies	27% ± 16%	Explore
myofibroblast cell	5 studies	18% ± 2%	Explore
progenitor cell	5 studies	38% ± 18%	Explore
precursor B cell	5 studies	28% ± 6%	Explore
T follicular helper cell	5 studies	22% ± 6%	Explore
naive B cell	5 studies	24% ± 7%	Explore
plasmacytoid dendritic cell	5 studies	26% ± 16%	Explore
mast cell	4 studies	17% ± 1%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	23% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	24% ± 3%	Explore
neuron	4 studies	38% ± 24%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	26% ± 8%	Explore
innate lymphoid cell	4 studies	23% ± 6%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	32% ± 5%	Explore
leukocyte	4 studies	28% ± 3%	Explore
mucosal invariant T cell	4 studies	23% ± 9%	Explore
squamous epithelial cell	3 studies	36% ± 24%	Explore
pancreatic A cell	3 studies	50% ± 15%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	23% ± 6%	Explore
plasmablast	3 studies	32% ± 11%	Explore
immature B cell	3 studies	28% ± 3%	Explore
serous secreting cell	3 studies	27% ± 2%	Explore
chondrocyte	3 studies	21% ± 5%	Explore
exhausted T cell	3 studies	19% ± 3%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	23% ± 4%	Explore
cholangiocyte	3 studies	52% ± 24%	Explore
glutamatergic neuron	3 studies	31% ± 9%	Explore
dendritic cell	3 studies	43% ± 12%	Explore
erythrocyte	3 studies	36% ± 18%	Explore
CD4-positive, alpha-beta memory T cell	3 studies	30% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	10 studies	24% ± 6%	Explore
intestine	9 studies	21% ± 6%	Explore
liver	5 studies	36% ± 20%	Explore
peripheral blood	5 studies	29% ± 4%	Explore
kidney	5 studies	18% ± 2%	Explore
brain	5 studies	22% ± 5%	Explore
pancreas	4 studies	33% ± 18%	Explore
uterus	3 studies	37% ± 13%	Explore
prostate	3 studies	26% ± 8%	Explore
lymph node	3 studies	21% ± 2%	Explore
breast	3 studies	21% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	33485.79	226 / 226	32%	1.17	130 / 406
esophagus	100%	5853.76	1440 / 1445	11%	0.24	21 / 183
stomach	99%	7221.95	357 / 359	8%	0.17	24 / 286
lung	99%	7690.66	574 / 578	7%	0.13	79 / 1155
intestine	100%	7847.99	965 / 966	4%	0.08	22 / 527
uterus	100%	4828.45	170 / 170	3%	0.05	14 / 459
bladder	100%	6670.38	21 / 21	1%	0.02	7 / 504
adrenal gland	100%	15545.03	258 / 258	1%	0.02	2 / 230
breast	100%	5747.35	459 / 459	1%	0.01	6 / 1118
pancreas	99%	6882.12	326 / 328	1%	0.02	2 / 178
skin	100%	9822.22	1806 / 1809	0%	0.02	2 / 472
kidney	100%	5865.75	89 / 89	0%	0.00	1 / 901
muscle	100%	27636.49	803 / 803	0%	0	0 / 0
ovary	99%	8195.19	179 / 180	0%	0.01	2 / 430
blood vessel	100%	7249.62	1333 / 1335	0%	0	0 / 0
adipose	100%	5395.82	1199 / 1204	0%	0	0 / 0
thymus	99%	5018.34	645 / 653	0%	0	0 / 605
prostate	98%	7040.10	241 / 245	0%	0.00	1 / 502
brain	96%	4474.53	2534 / 2642	0%	0	0 / 705
spleen	93%	2569.82	223 / 241	0%	0	0 / 0
peripheral blood	83%	5528.12	772 / 929	0%	0	0 / 0
heart	81%	2867.66	696 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1