Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 13 studies | 25% ± 8% | |
lung | 7 studies | 26% ± 6% | |
brain | 5 studies | 25% ± 7% | |
intestine | 5 studies | 21% ± 9% | |
lymph node | 4 studies | 16% ± 1% | |
liver | 4 studies | 25% ± 13% | |
pancreas | 3 studies | 29% ± 5% | |
kidney | 3 studies | 20% ± 2% | |
placenta | 3 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4743.98 | 1445 / 1445 | 100% | 72.30 | 183 / 183 |
liver | 100% | 3255.73 | 226 / 226 | 100% | 71.16 | 406 / 406 |
lung | 100% | 5253.46 | 578 / 578 | 100% | 96.08 | 1155 / 1155 |
ovary | 100% | 3500.48 | 180 / 180 | 100% | 57.59 | 430 / 430 |
pancreas | 100% | 2734.24 | 328 / 328 | 100% | 94.48 | 178 / 178 |
skin | 100% | 6096.66 | 1809 / 1809 | 100% | 96.83 | 472 / 472 |
stomach | 100% | 3636.60 | 359 / 359 | 100% | 87.33 | 286 / 286 |
thymus | 100% | 4249.09 | 653 / 653 | 100% | 88.02 | 605 / 605 |
uterus | 100% | 4822.41 | 170 / 170 | 100% | 113.00 | 459 / 459 |
intestine | 100% | 4827.31 | 966 / 966 | 100% | 103.01 | 526 / 527 |
prostate | 100% | 5288.39 | 245 / 245 | 100% | 128.22 | 501 / 502 |
kidney | 100% | 4042.54 | 89 / 89 | 100% | 66.86 | 899 / 901 |
breast | 100% | 5307.56 | 459 / 459 | 100% | 103.61 | 1115 / 1118 |
brain | 100% | 3410.75 | 2631 / 2642 | 100% | 85.37 | 705 / 705 |
adrenal gland | 100% | 4480.57 | 258 / 258 | 100% | 59.00 | 229 / 230 |
bladder | 100% | 4813.57 | 21 / 21 | 99% | 103.67 | 501 / 504 |
adipose | 100% | 5113.20 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 75.01 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 177.17 | 29 / 29 |
muscle | 100% | 7243.48 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 6290.98 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 108.93 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 82.69 | 1 / 1 |
blood vessel | 100% | 4653.46 | 1334 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 5716.45 | 922 / 929 | 0% | 0 | 0 / 0 |
heart | 99% | 3777.82 | 854 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006511 | Biological process | ubiquitin-dependent protein catabolic process |
GO_0007127 | Biological process | meiosis I |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0000502 | Cellular component | proteasome complex |
GO_0034774 | Cellular component | secretory granule lumen |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0005838 | Cellular component | proteasome regulatory particle |
GO_0008541 | Cellular component | proteasome regulatory particle, lid subcomplex |
GO_0022624 | Cellular component | proteasome accessory complex |
GO_0016020 | Cellular component | membrane |
GO_0005634 | Cellular component | nucleus |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | PSMD13 |
Protein name | Proteasome 26S subunit, non-ATPase 13 26S proteasome non-ATPase regulatory subunit 13 (26S proteasome regulatory subunit RPN9) (26S proteasome regulatory subunit S11) (26S proteasome regulatory subunit p40.5) |
Synonyms | hCG_37689 |
Description | FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . |
Accessions | ENST00000528906.5 ENST00000529372.5 ENST00000352303.9 ENST00000382671.8 ENST00000526783.1 B4DJ66 ENST00000431206.6 [Q9UNM6-2] E9PL38 J3KNQ3 ENST00000525665.5 F8W8J6 H0YD73 E9PQG3 ENST00000532097.6 [Q9UNM6-1] E9PPD2 Q9UNM6 |