Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3531.43 | 1445 / 1445 | 100% | 8.21 | 183 / 183 |
intestine | 100% | 4105.57 | 966 / 966 | 100% | 11.38 | 527 / 527 |
prostate | 100% | 4405.07 | 245 / 245 | 100% | 13.91 | 502 / 502 |
liver | 100% | 6552.26 | 226 / 226 | 100% | 13.20 | 405 / 406 |
kidney | 100% | 4416.48 | 89 / 89 | 99% | 7.83 | 895 / 901 |
stomach | 100% | 3178.08 | 359 / 359 | 99% | 10.40 | 284 / 286 |
thymus | 100% | 2743.19 | 652 / 653 | 99% | 7.59 | 600 / 605 |
lung | 100% | 3445.76 | 577 / 578 | 99% | 8.23 | 1145 / 1155 |
pancreas | 100% | 3310.39 | 328 / 328 | 99% | 16.73 | 176 / 178 |
ovary | 100% | 2190.89 | 180 / 180 | 99% | 7.08 | 425 / 430 |
bladder | 100% | 3810.38 | 21 / 21 | 98% | 9.89 | 496 / 504 |
breast | 100% | 3043.10 | 459 / 459 | 97% | 8.94 | 1090 / 1118 |
uterus | 100% | 2465.10 | 170 / 170 | 97% | 7.13 | 445 / 459 |
skin | 100% | 2967.39 | 1809 / 1809 | 97% | 6.31 | 457 / 472 |
adrenal gland | 100% | 3553.58 | 258 / 258 | 95% | 4.82 | 218 / 230 |
brain | 91% | 1108.63 | 2394 / 2642 | 99% | 5.86 | 696 / 705 |
adipose | 100% | 3433.42 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.85 | 29 / 29 |
peripheral blood | 100% | 5232.35 | 929 / 929 | 0% | 0 | 0 / 0 |
spleen | 100% | 5249.85 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.82 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 11.41 | 1 / 1 |
blood vessel | 100% | 4634.48 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 2829.79 | 856 / 861 | 0% | 0 | 0 / 0 |
muscle | 99% | 2459.53 | 798 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 7.33 | 79 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0001938 | Biological process | positive regulation of endothelial cell proliferation |
GO_0000731 | Biological process | DNA synthesis involved in DNA repair |
GO_0006261 | Biological process | DNA-templated DNA replication |
GO_0005654 | Cellular component | nucleoplasm |
GO_0043625 | Cellular component | delta DNA polymerase complex |
GO_0003887 | Molecular function | DNA-directed DNA polymerase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | POLD4 |
Protein name | Polymerase (DNA-directed), delta 4 DNA polymerase delta subunit 4 (DNA polymerase delta subunit p12) DNA polymerase delta 4, accessory subunit |
Synonyms | POLDS |
Description | FUNCTION: As a component of the tetrameric DNA polymerase delta complex (Pol-delta4), plays a role in high fidelity genome replication and repair. Within this complex, increases the rate of DNA synthesis and decreases fidelity by regulating POLD1 polymerase and proofreading 3' to 5' exonuclease activity . Pol-delta4 participates in Okazaki fragment processing, through both the short flap pathway, as well as a nick translation system . Under conditions of DNA replication stress, required for the repair of broken replication forks through break-induced replication (BIR), a mechanism that may induce segmental genomic duplications of up to 200 kb . Involved in Pol-delta4 translesion synthesis (TLS) of templates carrying O6-methylguanine or abasic sites . Its degradation in response to DNA damage is required for the inhibition of fork progression and cell survival . . |
Accessions | ENST00000312419.8 [Q9HCU8-1] Q6NSD7 ENST00000530584.5 ENST00000529704.5 Q9HCU8 ENST00000532830.5 ENST00000531239.2 ENST00000539074.1 [Q9HCU8-2] E9PL15 |