Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 12 studies | 28% ± 11% | |
peripheral blood | 9 studies | 23% ± 8% | |
intestine | 9 studies | 19% ± 6% | |
liver | 9 studies | 29% ± 9% | |
kidney | 7 studies | 29% ± 11% | |
uterus | 6 studies | 23% ± 5% | |
placenta | 4 studies | 50% ± 23% | |
breast | 4 studies | 20% ± 4% | |
adipose | 3 studies | 36% ± 13% | |
adrenal gland | 3 studies | 25% ± 8% | |
prostate | 3 studies | 24% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 99% | 25346.98 | 223 / 226 | 100% | 173.38 | 404 / 406 |
breast | 97% | 41135.90 | 446 / 459 | 92% | 44.35 | 1024 / 1118 |
lung | 95% | 12173.09 | 547 / 578 | 86% | 44.79 | 993 / 1155 |
bladder | 86% | 9752.14 | 18 / 21 | 93% | 57.77 | 467 / 504 |
skin | 83% | 9099.95 | 1493 / 1809 | 88% | 47.90 | 413 / 472 |
kidney | 74% | 9750.63 | 66 / 89 | 90% | 451.43 | 814 / 901 |
intestine | 54% | 4136.84 | 517 / 966 | 88% | 44.60 | 464 / 527 |
uterus | 66% | 4216.98 | 113 / 170 | 68% | 35.69 | 310 / 459 |
ovary | 45% | 2863.03 | 81 / 180 | 80% | 35.01 | 345 / 430 |
thymus | 38% | 2159.90 | 250 / 653 | 86% | 28.89 | 520 / 605 |
adrenal gland | 94% | 11006.79 | 242 / 258 | 28% | 14.51 | 64 / 230 |
stomach | 32% | 2051.76 | 114 / 359 | 85% | 42.11 | 243 / 286 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.54 | 1 / 1 |
adipose | 100% | 55507.98 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 99% | 26259.39 | 795 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 46.72 | 28 / 29 |
pancreas | 4% | 188.42 | 14 / 328 | 89% | 41.28 | 158 / 178 |
esophagus | 30% | 1837.67 | 429 / 1445 | 63% | 22.02 | 115 / 183 |
prostate | 20% | 1544.50 | 48 / 245 | 65% | 16.65 | 325 / 502 |
heart | 73% | 10935.03 | 627 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 72% | 25204.07 | 670 / 929 | 0% | 0 | 0 / 0 |
spleen | 61% | 3216.61 | 148 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 59% | 7079.72 | 793 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 51% | 14.16 | 41 / 80 |
tonsil | 0% | 0 | 0 / 0 | 49% | 11.27 | 22 / 45 |
brain | 4% | 233.78 | 113 / 2642 | 44% | 19.07 | 310 / 705 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042149 | Biological process | cellular response to glucose starvation |
GO_0010890 | Biological process | positive regulation of sequestering of triglyceride |
GO_0014070 | Biological process | response to organic cyclic compound |
GO_0009410 | Biological process | response to xenobiotic stimulus |
GO_0019915 | Biological process | lipid storage |
GO_1905691 | Biological process | lipid droplet disassembly |
GO_0015909 | Biological process | long-chain fatty acid transport |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0005886 | Cellular component | plasma membrane |
GO_0005811 | Cellular component | lipid droplet |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
Gene name | PLIN2 |
Protein name | Perilipin-2 (Adipophilin) (Adipose differentiation-related protein) (ADRP) Perilipin 2 |
Synonyms | ADFP |
Description | FUNCTION: Structural component of lipid droplets, which is required for the formation and maintenance of lipid storage droplets. . |
Accessions | Q99541 ENST00000380464.7 ENST00000276914.7 ENST00000380465.7 Q5SYF4 Q5SYF5 Q5SYF3 ENST00000434144.5 |