Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 16 studies | 24% ± 10% | |
peripheral blood | 7 studies | 28% ± 8% | |
intestine | 5 studies | 19% ± 4% | |
placenta | 4 studies | 34% ± 12% | |
uterus | 4 studies | 28% ± 13% | |
lymph node | 4 studies | 19% ± 3% | |
breast | 4 studies | 28% ± 8% | |
pancreas | 3 studies | 25% ± 6% | |
prostate | 3 studies | 30% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 5012.86 | 170 / 170 | 100% | 167.29 | 458 / 459 |
thymus | 100% | 6577.77 | 652 / 653 | 100% | 93.33 | 603 / 605 |
esophagus | 100% | 5103.32 | 1438 / 1445 | 100% | 177.36 | 183 / 183 |
kidney | 100% | 10934.19 | 89 / 89 | 99% | 136.87 | 895 / 901 |
lung | 100% | 11951.85 | 578 / 578 | 99% | 178.51 | 1147 / 1155 |
stomach | 100% | 9508.06 | 359 / 359 | 99% | 158.69 | 284 / 286 |
bladder | 100% | 8405.24 | 21 / 21 | 99% | 154.25 | 499 / 504 |
prostate | 100% | 10399.39 | 244 / 245 | 99% | 207.29 | 499 / 502 |
intestine | 99% | 5131.32 | 956 / 966 | 100% | 164.68 | 525 / 527 |
breast | 100% | 9396.47 | 459 / 459 | 98% | 130.74 | 1101 / 1118 |
adrenal gland | 100% | 4872.73 | 258 / 258 | 98% | 106.88 | 225 / 230 |
skin | 96% | 9291.03 | 1731 / 1809 | 100% | 152.04 | 470 / 472 |
pancreas | 95% | 4421.84 | 313 / 328 | 99% | 165.87 | 177 / 178 |
ovary | 98% | 3801.96 | 177 / 180 | 96% | 75.42 | 412 / 430 |
liver | 98% | 5346.92 | 221 / 226 | 95% | 79.20 | 387 / 406 |
brain | 83% | 2035.26 | 2205 / 2642 | 82% | 40.50 | 579 / 705 |
adipose | 100% | 9836.83 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 140.29 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 162.31 | 29 / 29 |
spleen | 100% | 8919.14 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 176.46 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 55.22 | 1 / 1 |
muscle | 99% | 7214.38 | 798 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 7576.82 | 915 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 4272.31 | 844 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 92% | 3093.84 | 1231 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006915 | Biological process | apoptotic process |
GO_0061179 | Biological process | negative regulation of insulin secretion involved in cellular response to glucose stimulus |
GO_0006468 | Biological process | protein phosphorylation |
GO_0043066 | Biological process | negative regulation of apoptotic process |
GO_0046777 | Biological process | protein autophosphorylation |
GO_0007346 | Biological process | regulation of mitotic cell cycle |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0004674 | Molecular function | protein serine/threonine kinase activity |
GO_0005515 | Molecular function | protein binding |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0005524 | Molecular function | ATP binding |
Gene name | PIM3 |
Protein name | non-specific serine/threonine protein kinase (EC 2.7.11.1) Serine/threonine-protein kinase pim-3 (EC 2.7.11.1) |
Synonyms | |
Description | FUNCTION: Proto-oncogene with serine/threonine kinase activity that can prevent apoptosis, promote cell survival and protein translation. May contribute to tumorigenesis through: the delivery of survival signaling through phosphorylation of BAD which induces release of the anti-apoptotic protein Bcl-X(L), the regulation of cell cycle progression, protein synthesis and by regulation of MYC transcriptional activity. Additionally to this role on tumorigenesis, can also negatively regulate insulin secretion by inhibiting the activation of MAPK1/3 (ERK1/2), through SOCS6. Involved also in the control of energy metabolism and regulation of AMPK activity in modulating MYC and PPARGC1A protein levels and cell growth. . |
Accessions | Q6P2J9 Q86V86 ENST00000360612.5 |