GGNBP2 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
B cell	31 studies	26% ± 10%	Explore
natural killer cell	28 studies	26% ± 8%	Explore
endothelial cell	28 studies	25% ± 8%	Explore
CD4-positive, alpha-beta T cell	23 studies	25% ± 10%	Explore
CD8-positive, alpha-beta T cell	23 studies	25% ± 8%	Explore
fibroblast	21 studies	25% ± 8%	Explore
smooth muscle cell	20 studies	19% ± 4%	Explore
T cell	19 studies	24% ± 6%	Explore
memory B cell	19 studies	27% ± 7%	Explore
naive B cell	17 studies	25% ± 8%	Explore
pericyte	17 studies	20% ± 5%	Explore
classical monocyte	16 studies	26% ± 14%	Explore
regulatory T cell	16 studies	23% ± 6%	Explore
gamma-delta T cell	15 studies	27% ± 9%	Explore
macrophage	14 studies	22% ± 6%	Explore
endothelial cell of lymphatic vessel	14 studies	23% ± 7%	Explore
plasmacytoid dendritic cell	14 studies	36% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	26% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	14 studies	26% ± 8%	Explore
non-classical monocyte	13 studies	30% ± 18%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	12 studies	24% ± 7%	Explore
mature NK T cell	12 studies	24% ± 5%	Explore
mucosal invariant T cell	12 studies	23% ± 6%	Explore
dendritic cell	11 studies	31% ± 20%	Explore
conventional dendritic cell	11 studies	27% ± 20%	Explore
CD8-positive, alpha-beta memory T cell	10 studies	25% ± 5%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	10 studies	29% ± 9%	Explore
effector memory CD8-positive, alpha-beta T cell	10 studies	27% ± 11%	Explore
mast cell	9 studies	23% ± 7%	Explore
monocyte	9 studies	24% ± 4%	Explore
CD4-positive, alpha-beta memory T cell	9 studies	24% ± 4%	Explore
epithelial cell	9 studies	32% ± 21%	Explore
adipocyte	9 studies	27% ± 6%	Explore
basal cell	8 studies	27% ± 12%	Explore
ciliated cell	8 studies	29% ± 13%	Explore
capillary endothelial cell	8 studies	17% ± 1%	Explore
connective tissue cell	8 studies	19% ± 3%	Explore
type I pneumocyte	7 studies	26% ± 4%	Explore
myofibroblast cell	7 studies	22% ± 5%	Explore
endothelial cell of artery	7 studies	18% ± 3%	Explore
endothelial cell of vascular tree	7 studies	21% ± 4%	Explore
myeloid cell	7 studies	27% ± 10%	Explore
hematopoietic precursor cell	6 studies	29% ± 15%	Explore
microglial cell	6 studies	23% ± 6%	Explore
lymphocyte	6 studies	31% ± 8%	Explore
astrocyte	6 studies	25% ± 10%	Explore
T follicular helper cell	6 studies	25% ± 7%	Explore
secretory cell	5 studies	24% ± 9%	Explore
leukocyte	5 studies	23% ± 4%	Explore
precursor B cell	5 studies	29% ± 7%	Explore
pro-B cell	5 studies	24% ± 2%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	32% ± 14%	Explore
vein endothelial cell	5 studies	19% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	18% ± 2%	Explore
neuron	4 studies	20% ± 3%	Explore
retinal ganglion cell	4 studies	45% ± 27%	Explore
club cell	4 studies	22% ± 6%	Explore
progenitor cell	4 studies	21% ± 3%	Explore
immature B cell	4 studies	27% ± 3%	Explore
retina horizontal cell	4 studies	24% ± 10%	Explore
innate lymphoid cell	4 studies	31% ± 5%	Explore
type II pneumocyte	4 studies	24% ± 7%	Explore
abnormal cell	4 studies	27% ± 7%	Explore
alveolar macrophage	4 studies	23% ± 8%	Explore
interneuron	4 studies	36% ± 22%	Explore
oligodendrocyte	4 studies	24% ± 5%	Explore
ionocyte	3 studies	26% ± 4%	Explore
effector CD8-positive, alpha-beta T cell	3 studies	18% ± 2%	Explore
plasmablast	3 studies	45% ± 21%	Explore
neural crest cell	3 studies	18% ± 2%	Explore
glutamatergic neuron	3 studies	32% ± 18%	Explore
retinal bipolar neuron	3 studies	28% ± 9%	Explore
plasma cell	3 studies	29% ± 12%	Explore
amacrine cell	3 studies	33% ± 6%	Explore
germinal center B cell	3 studies	28% ± 2%	Explore
group 3 innate lymphoid cell	3 studies	38% ± 5%	Explore
goblet cell	3 studies	32% ± 19%	Explore
transit amplifying cell	3 studies	29% ± 17%	Explore
T-helper 17 cell	3 studies	24% ± 3%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	22% ± 7%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	19% ± 1%	Explore
erythrocyte	3 studies	28% ± 13%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	14 studies	30% ± 13%	Explore
lung	10 studies	26% ± 8%	Explore
eye	5 studies	26% ± 9%	Explore
brain	5 studies	30% ± 13%	Explore
intestine	5 studies	19% ± 4%	Explore
bone marrow	4 studies	22% ± 3%	Explore
adipose	4 studies	27% ± 7%	Explore
uterus	3 studies	28% ± 12%	Explore
lymph node	3 studies	24% ± 5%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	100%	5263.24	21 / 21	100%	22.30	504 / 504
esophagus	100%	4619.37	1445 / 1445	100%	22.85	183 / 183
intestine	100%	5530.60	966 / 966	100%	21.61	527 / 527
lung	100%	4892.18	578 / 578	100%	24.19	1155 / 1155
ovary	100%	5391.08	180 / 180	100%	12.23	430 / 430
breast	100%	5171.30	459 / 459	100%	27.93	1117 / 1118
prostate	100%	4263.58	245 / 245	100%	20.28	501 / 502
uterus	100%	4878.81	170 / 170	100%	23.77	458 / 459
brain	100%	3582.14	2634 / 2642	100%	22.54	705 / 705
pancreas	100%	2709.41	327 / 328	100%	23.48	178 / 178
thymus	100%	4287.25	653 / 653	100%	26.55	603 / 605
stomach	100%	3832.13	359 / 359	100%	20.21	285 / 286
kidney	100%	3584.20	89 / 89	100%	21.49	897 / 901
liver	100%	2541.50	226 / 226	99%	16.65	403 / 406
skin	100%	5509.09	1809 / 1809	99%	22.36	467 / 472
adrenal gland	100%	4021.78	258 / 258	98%	19.60	225 / 230
adipose	100%	5529.22	1204 / 1204	0%	0	0 / 0
blood vessel	100%	5637.16	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	23.79	29 / 29
muscle	100%	4219.34	803 / 803	0%	0	0 / 0
spleen	100%	5713.96	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	23.31	45 / 45
ureter	0%	0	0 / 0	100%	8.44	1 / 1
heart	98%	2791.42	843 / 861	0%	0	0 / 0
peripheral blood	96%	3343.06	890 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	94%	16.85	75 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0042532	Biological process	negative regulation of tyrosine phosphorylation of STAT protein
GO_0008285	Biological process	negative regulation of cell population proliferation
GO_0033140	Biological process	negative regulation of peptidyl-serine phosphorylation of STAT protein
GO_0007283	Biological process	spermatogenesis
GO_0030154	Biological process	cell differentiation
GO_0060716	Biological process	labyrinthine layer blood vessel development
GO_0010629	Biological process	negative regulation of gene expression
GO_0031410	Cellular component	cytoplasmic vesicle
GO_0005737	Cellular component	cytoplasm
GO_0005634	Cellular component	nucleus

IV. Literature review

[source]

Gene name	GGNBP2
Protein name	Gametogenetin-binding protein 2 (Laryngeal carcinoma-related protein 1) (Protein ZNF403) Gametogenetin-binding protein 2 (Protein ZNF403) Gametogenetin-binding protein 2
Synonyms	LZK1 ZNF403 LCRG1
Description	FUNCTION: May be involved in spermatogenesis. FUNCTION: May be involved in spermatogenesis. . FUNCTION: May be involved in spermatogenesis. .
Accessions	ENST00000611219.1 A0A087X1D7 A0A087X0E5 ENST00000621686.2 [Q9H3C7-1] ENST00000633772.1 ENST00000616019.1 Q9H3C7 A0A087X1N0 ENST00000613102.5 [Q9H3C7-1] ENST00000632761.1 ENST00000615952.1 ENST00000633758.1

GGNBP2 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review