Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 12 studies | 21% ± 6% | |
lung | 7 studies | 30% ± 9% | |
brain | 5 studies | 23% ± 6% | |
kidney | 4 studies | 21% ± 3% | |
uterus | 4 studies | 24% ± 10% | |
pancreas | 3 studies | 46% ± 20% | |
placenta | 3 studies | 23% ± 1% | |
eye | 3 studies | 30% ± 12% | |
intestine | 3 studies | 24% ± 10% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2612.21 | 2642 / 2642 | 100% | 172.07 | 705 / 705 |
esophagus | 100% | 2185.88 | 1445 / 1445 | 100% | 95.79 | 183 / 183 |
kidney | 100% | 2555.57 | 89 / 89 | 100% | 148.15 | 901 / 901 |
lung | 100% | 2559.34 | 578 / 578 | 100% | 126.26 | 1155 / 1155 |
ovary | 100% | 2017.22 | 180 / 180 | 100% | 85.23 | 430 / 430 |
pancreas | 100% | 1634.91 | 328 / 328 | 100% | 127.79 | 178 / 178 |
prostate | 100% | 1993.24 | 245 / 245 | 100% | 150.76 | 502 / 502 |
skin | 100% | 3114.97 | 1809 / 1809 | 100% | 182.90 | 472 / 472 |
stomach | 100% | 2169.33 | 359 / 359 | 100% | 101.88 | 286 / 286 |
uterus | 100% | 2233.64 | 170 / 170 | 100% | 130.69 | 459 / 459 |
thymus | 100% | 2467.94 | 653 / 653 | 100% | 153.40 | 604 / 605 |
intestine | 100% | 2298.98 | 966 / 966 | 100% | 112.11 | 525 / 527 |
adrenal gland | 100% | 3814.12 | 258 / 258 | 100% | 208.11 | 229 / 230 |
liver | 100% | 1760.05 | 225 / 226 | 100% | 127.20 | 406 / 406 |
bladder | 100% | 2276.38 | 21 / 21 | 99% | 115.29 | 501 / 504 |
breast | 100% | 2660.60 | 459 / 459 | 99% | 128.56 | 1111 / 1118 |
adipose | 100% | 2798.31 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2957.61 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 99.77 | 29 / 29 |
spleen | 100% | 1938.79 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 115.27 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 76.75 | 1 / 1 |
muscle | 100% | 2559.58 | 802 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 128.19 | 79 / 80 |
heart | 99% | 2203.76 | 850 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 97% | 1788.76 | 899 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071816 | Biological process | tail-anchored membrane protein insertion into ER membrane |
GO_0045050 | Biological process | protein insertion into ER membrane by stop-transfer membrane-anchor sequence |
GO_0072546 | Cellular component | EMC complex |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0032977 | Molecular function | membrane insertase activity |
GO_0030246 | Molecular function | carbohydrate binding |
GO_0005515 | Molecular function | protein binding |
Gene name | EMC7 |
Protein name | ER membrane protein complex subunit 7 Endoplasmic reticulum membrane protein complex subunit 7 (ER membrane protein complex subunit 7) |
Synonyms | UNQ905/PRO1926 C15orf24 C11orf3 HT022 |
Description | FUNCTION: Part of the endoplasmic reticulum membrane protein complex (EMC) that enables the energy-independent insertion into endoplasmic reticulum membranes of newly synthesized membrane proteins . Preferentially accommodates proteins with transmembrane domains that are weakly hydrophobic or contain destabilizing features such as charged and aromatic residues . Involved in the cotranslational insertion of multi-pass membrane proteins in which stop-transfer membrane-anchor sequences become ER membrane spanning helices . It is also required for the post-translational insertion of tail-anchored/TA proteins in endoplasmic reticulum membranes . By mediating the proper cotranslational insertion of N-terminal transmembrane domains in an N-exo topology, with translocated N-terminus in the lumen of the ER, controls the topology of multi-pass membrane proteins like the G protein-coupled receptors . By regulating the insertion of various proteins in membranes, it is indirectly involved in many cellular processes (Probable). . |
Accessions | ENST00000256545.9 H0YDX2 H0YDT8 ENST00000527822.5 Q9NPA0 ENST00000528949.1 |