Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 11 studies | 22% ± 6% | |
lung | 7 studies | 32% ± 10% | |
brain | 6 studies | 24% ± 9% | |
intestine | 6 studies | 23% ± 9% | |
kidney | 5 studies | 21% ± 5% | |
lymph node | 4 studies | 24% ± 6% | |
pancreas | 3 studies | 59% ± 19% | |
placenta | 3 studies | 23% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 3695.91 | 328 / 328 | 100% | 44.82 | 178 / 178 |
thymus | 100% | 14264.98 | 653 / 653 | 100% | 72.57 | 605 / 605 |
prostate | 100% | 6032.09 | 245 / 245 | 100% | 50.68 | 500 / 502 |
adrenal gland | 100% | 6499.44 | 258 / 258 | 100% | 58.71 | 229 / 230 |
esophagus | 100% | 3725.82 | 1444 / 1445 | 99% | 27.46 | 182 / 183 |
brain | 100% | 5191.20 | 2640 / 2642 | 99% | 48.06 | 701 / 705 |
ovary | 100% | 6465.73 | 180 / 180 | 99% | 37.68 | 427 / 430 |
uterus | 100% | 4561.24 | 170 / 170 | 99% | 39.59 | 455 / 459 |
kidney | 100% | 7773.45 | 89 / 89 | 99% | 36.09 | 891 / 901 |
intestine | 100% | 4340.66 | 966 / 966 | 99% | 39.07 | 520 / 527 |
liver | 100% | 4442.32 | 226 / 226 | 99% | 27.29 | 400 / 406 |
breast | 100% | 3755.66 | 459 / 459 | 98% | 34.49 | 1101 / 1118 |
skin | 100% | 4049.12 | 1808 / 1809 | 99% | 45.92 | 465 / 472 |
stomach | 100% | 4631.49 | 359 / 359 | 98% | 36.29 | 281 / 286 |
lung | 100% | 4919.84 | 576 / 578 | 99% | 35.82 | 1138 / 1155 |
bladder | 100% | 3959.62 | 21 / 21 | 97% | 37.59 | 490 / 504 |
eye | 0% | 0 | 0 / 0 | 100% | 53.47 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 27.50 | 29 / 29 |
muscle | 100% | 15254.75 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 4121.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.03 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 27.72 | 1 / 1 |
blood vessel | 100% | 6559.76 | 1333 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 3233.17 | 1202 / 1204 | 0% | 0 | 0 / 0 |
heart | 97% | 6947.65 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 94% | 3014.71 | 872 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0010595 | Biological process | positive regulation of endothelial cell migration |
GO_0001525 | Biological process | angiogenesis |
GO_0001938 | Biological process | positive regulation of endothelial cell proliferation |
GO_0071816 | Biological process | tail-anchored membrane protein insertion into ER membrane |
GO_0045050 | Biological process | protein insertion into ER membrane by stop-transfer membrane-anchor sequence |
GO_0045766 | Biological process | positive regulation of angiogenesis |
GO_0072546 | Cellular component | EMC complex |
GO_0005576 | Cellular component | extracellular region |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0032977 | Molecular function | membrane insertase activity |
Gene name | EMC10 |
Protein name | ER membrane protein complex subunit 10 (Hematopoietic signal peptide-containing membrane domain-containing protein 1) ER membrane protein complex subunit 10 |
Synonyms | UNQ764/PRO1556 INM02 C19orf63 |
Description | FUNCTION: Part of the endoplasmic reticulum membrane protein complex (EMC) that enables the energy-independent insertion into endoplasmic reticulum membranes of newly synthesized membrane proteins . Preferentially accommodates proteins with transmembrane domains that are weakly hydrophobic or contain destabilizing features such as charged and aromatic residues . Involved in the cotranslational insertion of multi-pass membrane proteins in which stop-transfer membrane-anchor sequences become ER membrane spanning helices . It is also required for the post-translational insertion of tail-anchored/TA proteins in endoplasmic reticulum membranes . By mediating the proper cotranslational insertion of N-terminal transmembrane domains in an N-exo topology, with translocated N-terminus in the lumen of the ER, controls the topology of multi-pass membrane proteins like the G protein-coupled receptors . By regulating the insertion of various proteins in membranes, it is indirectly involved in many cellular processes (Probable). Promotes angiogenesis and tissue repair in the heart after myocardial infarction. Stimulates cardiac endothelial cell migration and outgrowth via the activation of p38 MAPK, PAK and MAPK2 signaling pathways . . |
Accessions | ENST00000334976.11 [Q5UCC4-1] ENST00000376918.7 [Q5UCC4-2] M0QYY4 Q5UCC4 ENST00000598585.1 M0R030 ENST00000601780.5 ENST00000597799.1 M0R2A0 ENST00000599293.1 ENST00000597426.1 M0R1B7 |