Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 38 studies | 38% ± 15% | |
macrophage | 18 studies | 25% ± 8% | |
fibroblast | 16 studies | 22% ± 7% | |
epithelial cell | 15 studies | 35% ± 19% | |
ciliated cell | 14 studies | 35% ± 15% | |
capillary endothelial cell | 14 studies | 34% ± 15% | |
endothelial cell of lymphatic vessel | 13 studies | 24% ± 8% | |
basal cell | 13 studies | 33% ± 19% | |
type I pneumocyte | 12 studies | 34% ± 14% | |
endothelial cell of artery | 12 studies | 28% ± 13% | |
club cell | 11 studies | 32% ± 15% | |
vein endothelial cell | 11 studies | 30% ± 16% | |
microglial cell | 11 studies | 41% ± 17% | |
pericyte | 11 studies | 24% ± 6% | |
astrocyte | 11 studies | 31% ± 14% | |
secretory cell | 9 studies | 30% ± 10% | |
smooth muscle cell | 9 studies | 22% ± 9% | |
respiratory goblet cell | 8 studies | 37% ± 15% | |
goblet cell | 8 studies | 30% ± 8% | |
oligodendrocyte precursor cell | 7 studies | 28% ± 13% | |
enterocyte | 6 studies | 25% ± 6% | |
interneuron | 6 studies | 33% ± 18% | |
myeloid cell | 6 studies | 32% ± 10% | |
type II pneumocyte | 6 studies | 28% ± 10% | |
monocyte | 6 studies | 22% ± 5% | |
glutamatergic neuron | 6 studies | 34% ± 13% | |
oligodendrocyte | 6 studies | 22% ± 6% | |
GABAergic neuron | 5 studies | 33% ± 10% | |
progenitor cell | 5 studies | 22% ± 5% | |
brush cell | 5 studies | 35% ± 14% | |
dendritic cell | 5 studies | 30% ± 10% | |
Mueller cell | 5 studies | 34% ± 11% | |
squamous epithelial cell | 4 studies | 47% ± 19% | |
conventional dendritic cell | 4 studies | 20% ± 7% | |
abnormal cell | 4 studies | 25% ± 7% | |
glial cell | 4 studies | 26% ± 8% | |
endothelial cell of vascular tree | 4 studies | 24% ± 6% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 25% ± 4% | |
hepatocyte | 4 studies | 36% ± 18% | |
luminal cell of prostate epithelium | 4 studies | 26% ± 6% | |
connective tissue cell | 4 studies | 31% ± 14% | |
myofibroblast cell | 4 studies | 20% ± 3% | |
adipocyte | 4 studies | 32% ± 18% | |
hillock cell | 3 studies | 29% ± 10% | |
ionocyte | 3 studies | 35% ± 10% | |
glomerular endothelial cell | 3 studies | 31% ± 2% | |
transit amplifying cell | 3 studies | 18% ± 2% | |
retinal pigment epithelial cell | 3 studies | 32% ± 11% | |
lymphocyte | 3 studies | 17% ± 0% | |
neural progenitor cell | 3 studies | 31% ± 14% | |
enteroendocrine cell | 3 studies | 32% ± 1% | |
mesothelial cell | 3 studies | 35% ± 7% | |
keratinocyte | 3 studies | 29% ± 5% | |
neuron | 3 studies | 32% ± 3% | |
mucus secreting cell | 3 studies | 30% ± 8% | |
kidney loop of Henle epithelial cell | 3 studies | 36% ± 18% | |
renal principal cell | 3 studies | 43% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 25186.47 | 1445 / 1445 | 100% | 10.68 | 183 / 183 |
prostate | 100% | 20550.56 | 245 / 245 | 100% | 6.47 | 502 / 502 |
pancreas | 100% | 16114.93 | 328 / 328 | 99% | 8.97 | 177 / 178 |
breast | 100% | 22525.06 | 459 / 459 | 99% | 7.36 | 1105 / 1118 |
thymus | 100% | 26189.94 | 653 / 653 | 99% | 8.17 | 597 / 605 |
bladder | 100% | 17826.29 | 21 / 21 | 98% | 7.93 | 496 / 504 |
lung | 100% | 22063.86 | 578 / 578 | 97% | 7.24 | 1125 / 1155 |
intestine | 100% | 21920.45 | 966 / 966 | 97% | 7.46 | 509 / 527 |
uterus | 100% | 18303.90 | 170 / 170 | 96% | 8.41 | 442 / 459 |
kidney | 100% | 17349.00 | 89 / 89 | 96% | 6.49 | 867 / 901 |
stomach | 100% | 19072.94 | 359 / 359 | 96% | 7.98 | 275 / 286 |
skin | 100% | 26542.75 | 1809 / 1809 | 95% | 5.36 | 450 / 472 |
ovary | 100% | 12498.97 | 180 / 180 | 94% | 4.44 | 405 / 430 |
brain | 88% | 5316.14 | 2337 / 2642 | 93% | 3.79 | 657 / 705 |
adrenal gland | 100% | 12045.40 | 257 / 258 | 73% | 2.35 | 169 / 230 |
liver | 100% | 10722.59 | 226 / 226 | 72% | 3.03 | 292 / 406 |
adipose | 100% | 19028.27 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 5.92 | 80 / 80 |
spleen | 100% | 12654.08 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 8.63 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.56 | 1 / 1 |
blood vessel | 100% | 12586.66 | 1333 / 1335 | 0% | 0 | 0 / 0 |
heart | 97% | 7756.19 | 837 / 861 | 0% | 0 | 0 / 0 |
muscle | 68% | 3241.42 | 547 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 17% | 1543.32 | 161 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 0.24 | 3 / 29 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0099072 | Biological process | regulation of postsynaptic membrane neurotransmitter receptor levels |
GO_0090090 | Biological process | negative regulation of canonical Wnt signaling pathway |
GO_0044331 | Biological process | cell-cell adhesion mediated by cadherin |
GO_0050821 | Biological process | protein stabilization |
GO_0016055 | Biological process | Wnt signaling pathway |
GO_0098609 | Biological process | cell-cell adhesion |
GO_0098978 | Cellular component | glutamatergic synapse |
GO_0030496 | Cellular component | midbody |
GO_0005915 | Cellular component | zonula adherens |
GO_0098685 | Cellular component | Schaffer collateral - CA1 synapse |
GO_0005886 | Cellular component | plasma membrane |
GO_0043197 | Cellular component | dendritic spine |
GO_0070062 | Cellular component | extracellular exosome |
GO_0098686 | Cellular component | hippocampal mossy fiber to CA3 synapse |
GO_0016342 | Cellular component | catenin complex |
GO_0005911 | Cellular component | cell-cell junction |
GO_0009986 | Cellular component | cell surface |
GO_0005829 | Cellular component | cytosol |
GO_0005912 | Cellular component | adherens junction |
GO_0030426 | Cellular component | growth cone |
GO_0005737 | Cellular component | cytoplasm |
GO_0030027 | Cellular component | lamellipodium |
GO_0099092 | Cellular component | postsynaptic density, intracellular component |
GO_0098831 | Cellular component | presynaptic active zone cytoplasmic component |
GO_0005634 | Cellular component | nucleus |
GO_0045296 | Molecular function | cadherin binding |
GO_0005102 | Molecular function | signaling receptor binding |
GO_0008013 | Molecular function | beta-catenin binding |
GO_1990782 | Molecular function | protein tyrosine kinase binding |
GO_0140311 | Molecular function | protein sequestering activity |
GO_0005515 | Molecular function | protein binding |
Gene name | CTNND1 |
Protein name | CTNND1 protein Catenin delta-1 (Cadherin-associated Src substrate) (CAS) (p120 catenin) (p120(ctn)) (p120(cas)) Catenin delta 1 |
Synonyms | KIAA0384 |
Description | FUNCTION: Key regulator of cell-cell adhesion that associates with and regulates the cell adhesion properties of both C-, E- and N-cadherins, being critical for their surface stability . Beside cell-cell adhesion, regulates gene transcription through several transcription factors including ZBTB33/Kaiso2 and GLIS2, and the activity of Rho family GTPases and downstream cytoskeletal dynamics . Implicated both in cell transformation by SRC and in ligand-induced receptor signaling through the EGF, PDGF, CSF-1 and ERBB2 receptors . . |
Accessions | ENST00000399050.10 [O60716-1] ENST00000426142.6 [O60716-21] ENST00000533189.1 A0A669KB05 ENST00000683201.1 ENST00000682621.1 ENST00000531007.2 ENST00000532649.5 [O60716-13] ENST00000531014.5 [O60716-26] ENST00000529526.5 [O60716-13] ENST00000526938.5 [O60716-7] ENST00000530748.5 [O60716-11] ENST00000532245.5 [O60716-21] A0A804HIL4 ENST00000532787.5 [O60716-22] ENST00000528232.5 [O60716-19] ENST00000524630.5 [O60716-5] ENST00000528621.5 [O60716-13] E9PKL1 A0A669KB62 ENST00000361332.8 [O60716-2] ENST00000673683.1 [O60716-5] ENST00000529986.5 [O60716-21] ENST00000529873.5 [O60716-14] ENST00000530068.5 Q96FS1 E9PKY0 ENST00000534579.5 [O60716-13] ENST00000527467.5 [O60716-25] ENST00000533667.5 [O60716-30] O60716 ENST00000361391.10 [O60716-6] ENST00000361796.9 [O60716-3] ENST00000530094.5 [O60716-18] ENST00000532463.5 [O60716-21] ENST00000674106.1 ENST00000532844.5 [O60716-9] A0A804HJM1 ENST00000526357.5 [O60716-10] ENST00000673826.1 A0A804HK15 C9JZR2 ENST00000529919.5 H0YC95 ENST00000674015.1 ENST00000358694.10 [O60716-5] ENST00000526772.5 [O60716-29] ENST00000525902.5 [O60716-27] ENST00000683769.1 ENST00000415361.6 [O60716-17] ENST00000428599.6 [O60716-5] |