CMTM7 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
macrophage	26 studies	29% ± 12%	Explore
regulatory T cell	20 studies	26% ± 6%	Explore
CD4-positive, alpha-beta T cell	19 studies	22% ± 4%	Explore
non-classical monocyte	18 studies	30% ± 10%	Explore
classical monocyte	18 studies	26% ± 9%	Explore
monocyte	15 studies	23% ± 8%	Explore
T cell	14 studies	20% ± 4%	Explore
B cell	14 studies	23% ± 9%	Explore
CD8-positive, alpha-beta T cell	13 studies	20% ± 4%	Explore
memory B cell	10 studies	22% ± 5%	Explore
microglial cell	10 studies	31% ± 12%	Explore
myeloid cell	10 studies	28% ± 6%	Explore
mast cell	9 studies	20% ± 2%	Explore
conventional dendritic cell	8 studies	26% ± 11%	Explore
basal cell	8 studies	29% ± 14%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	8 studies	20% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	8 studies	21% ± 6%	Explore
naive B cell	7 studies	18% ± 2%	Explore
dendritic cell	7 studies	29% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	19% ± 2%	Explore
type I pneumocyte	7 studies	23% ± 7%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	23% ± 6%	Explore
precursor B cell	6 studies	56% ± 11%	Explore
ciliated cell	6 studies	25% ± 10%	Explore
T follicular helper cell	6 studies	26% ± 6%	Explore
club cell	6 studies	24% ± 8%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	6 studies	21% ± 5%	Explore
endothelial cell	5 studies	23% ± 8%	Explore
pro-B cell	5 studies	62% ± 13%	Explore
endothelial cell of lymphatic vessel	5 studies	24% ± 4%	Explore
immature B cell	5 studies	39% ± 18%	Explore
type II pneumocyte	5 studies	24% ± 8%	Explore
gamma-delta T cell	5 studies	22% ± 5%	Explore
hematopoietic precursor cell	4 studies	24% ± 7%	Explore
epithelial cell	4 studies	31% ± 16%	Explore
mononuclear phagocyte	4 studies	31% ± 7%	Explore
alveolar macrophage	4 studies	26% ± 9%	Explore
exhausted T cell	3 studies	27% ± 4%	Explore
intermediate monocyte	3 studies	37% ± 15%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	23% ± 3%	Explore
leukocyte	3 studies	26% ± 7%	Explore
lymphocyte	3 studies	25% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	9 studies	22% ± 4%	Explore
lung	7 studies	24% ± 11%	Explore
bone marrow	4 studies	19% ± 3%	Explore
lymph node	3 studies	24% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	1368.15	653 / 653	98%	31.74	593 / 605
skin	97%	692.46	1755 / 1809	98%	48.38	463 / 472
bladder	100%	1194.62	21 / 21	94%	36.91	475 / 504
lung	100%	2103.78	578 / 578	94%	24.15	1084 / 1155
pancreas	99%	717.20	326 / 328	94%	43.09	168 / 178
stomach	96%	626.60	345 / 359	93%	21.59	267 / 286
kidney	100%	1163.51	89 / 89	87%	18.20	787 / 901
breast	100%	2150.28	459 / 459	82%	22.00	922 / 1118
intestine	90%	566.80	873 / 966	92%	21.32	485 / 527
uterus	99%	663.98	169 / 170	71%	25.21	326 / 459
ovary	64%	263.09	116 / 180	100%	89.91	428 / 430
prostate	100%	751.19	244 / 245	58%	6.78	289 / 502
esophagus	71%	279.92	1023 / 1445	76%	15.63	139 / 183
adrenal gland	100%	586.18	257 / 258	23%	2.98	53 / 230
adipose	100%	1177.10	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	21.00	80 / 80
lymph node	0%	0	0 / 0	100%	37.81	29 / 29
spleen	100%	2988.57	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	72.46	1 / 1
liver	54%	188.99	121 / 226	43%	6.63	174 / 406
peripheral blood	88%	2640.80	818 / 929	0%	0	0 / 0
brain	37%	159.17	979 / 2642	40%	5.18	281 / 705
heart	75%	313.75	644 / 861	0%	0	0 / 0
blood vessel	73%	381.61	979 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	73%	11.65	33 / 45
muscle	20%	74.32	157 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0