Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 3041.41 | 577 / 578 | 97% | 90.24 | 1115 / 1155 |
breast | 94% | 3615.04 | 433 / 459 | 90% | 48.89 | 1003 / 1118 |
brain | 92% | 2679.28 | 2443 / 2642 | 85% | 67.66 | 601 / 705 |
bladder | 95% | 2335.00 | 20 / 21 | 80% | 47.59 | 402 / 504 |
kidney | 84% | 2032.61 | 75 / 89 | 84% | 81.62 | 754 / 901 |
skin | 88% | 3321.36 | 1599 / 1809 | 79% | 40.56 | 373 / 472 |
prostate | 99% | 2031.15 | 242 / 245 | 62% | 15.85 | 309 / 502 |
intestine | 90% | 1453.97 | 868 / 966 | 70% | 33.87 | 369 / 527 |
esophagus | 71% | 1649.90 | 1020 / 1445 | 82% | 56.27 | 150 / 183 |
stomach | 74% | 720.21 | 264 / 359 | 76% | 33.50 | 217 / 286 |
pancreas | 44% | 390.48 | 145 / 328 | 93% | 91.62 | 166 / 178 |
adrenal gland | 65% | 624.90 | 167 / 258 | 65% | 32.78 | 150 / 230 |
uterus | 39% | 384.75 | 66 / 170 | 88% | 56.71 | 406 / 459 |
ovary | 23% | 243.73 | 41 / 180 | 99% | 136.84 | 424 / 430 |
spleen | 100% | 6843.41 | 241 / 241 | 0% | 0 | 0 / 0 |
thymus | 62% | 645.14 | 404 / 653 | 36% | 28.76 | 219 / 605 |
adipose | 96% | 2155.95 | 1157 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 101.63 | 43 / 45 |
peripheral blood | 93% | 6020.65 | 865 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 93% | 54.42 | 27 / 29 |
liver | 54% | 478.92 | 122 / 226 | 38% | 26.34 | 155 / 406 |
blood vessel | 64% | 1257.90 | 853 / 1335 | 0% | 0 | 0 / 0 |
heart | 35% | 353.11 | 304 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 13% | 2.72 | 10 / 80 |
muscle | 4% | 32.57 | 34 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006886 | Biological process | intracellular protein transport |
GO_0032456 | Biological process | endocytic recycling |
GO_0030175 | Cellular component | filopodium |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0005525 | Molecular function | GTP binding |
GO_0005515 | Molecular function | protein binding |
GO_0043014 | Molecular function | alpha-tubulin binding |
GO_0003924 | Molecular function | GTPase activity |
Gene name | ARL4C |
Protein name | ADP-ribosylation factor-like protein 4C (ADP-ribosylation factor-like protein 7) (ADP-ribosylation factor-like protein LAK) |
Synonyms | ARL7 |
Description | FUNCTION: Small GTP-binding protein which cycles between an inactive GDP-bound and an active GTP-bound form, and the rate of cycling is regulated by guanine nucleotide exchange factors (GEF) and GTPase-activating proteins (GAP). GTP-binding protein that does not act as an allosteric activator of the cholera toxin catalytic subunit. May be involved in transport between a perinuclear compartment and the plasma membrane, apparently linked to the ABCA1-mediated cholesterol secretion pathway. Recruits CYTH1, CYTH2, CYTH3 and CYTH4 to the plasma membrane in the GDP-bound form. Regulates the microtubule-dependent intracellular vesicular transport from early endosome to recycling endosome process. . |
Accessions | ENST00000390645.2 [P56559-1] ENST00000339728.6 [P56559-2] P56559 |