Name | Number of supported studies | Average coverage | |
---|---|---|---|
peripheral blood | 15 studies | 28% ± 7% | |
lung | 6 studies | 24% ± 5% | |
eye | 4 studies | 27% ± 9% | |
pancreas | 3 studies | 48% ± 5% | |
kidney | 3 studies | 29% ± 9% | |
brain | 3 studies | 28% ± 10% | |
intestine | 3 studies | 17% ± 3% | |
lymph node | 3 studies | 33% ± 8% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 91% | 3417.74 | 879 / 966 | 99% | 113.57 | 521 / 527 |
esophagus | 91% | 5153.09 | 1315 / 1445 | 98% | 103.92 | 180 / 183 |
lung | 84% | 2665.08 | 485 / 578 | 98% | 85.08 | 1128 / 1155 |
kidney | 87% | 2833.17 | 77 / 89 | 93% | 44.85 | 840 / 901 |
stomach | 78% | 2522.25 | 279 / 359 | 97% | 88.96 | 276 / 286 |
brain | 85% | 6883.52 | 2243 / 2642 | 68% | 36.15 | 481 / 705 |
adrenal gland | 58% | 3353.95 | 149 / 258 | 93% | 47.59 | 215 / 230 |
prostate | 70% | 1852.15 | 171 / 245 | 74% | 23.57 | 370 / 502 |
bladder | 52% | 1742.43 | 11 / 21 | 85% | 79.67 | 430 / 504 |
liver | 36% | 1115.91 | 82 / 226 | 81% | 42.64 | 330 / 406 |
breast | 36% | 790.87 | 166 / 459 | 80% | 36.66 | 897 / 1118 |
thymus | 23% | 581.49 | 147 / 653 | 92% | 38.66 | 554 / 605 |
ovary | 29% | 773.29 | 52 / 180 | 82% | 42.02 | 354 / 430 |
skin | 80% | 10773.80 | 1443 / 1809 | 31% | 17.96 | 146 / 472 |
pancreas | 10% | 219.07 | 33 / 328 | 97% | 85.21 | 172 / 178 |
uterus | 12% | 319.89 | 20 / 170 | 94% | 121.43 | 430 / 459 |
lymph node | 0% | 0 | 0 / 0 | 100% | 176.56 | 29 / 29 |
muscle | 100% | 21744.56 | 803 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 100% | 19517.20 | 929 / 929 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 162.35 | 45 / 45 |
spleen | 99% | 6014.51 | 238 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 88% | 3292.50 | 1175 / 1335 | 0% | 0 | 0 / 0 |
heart | 83% | 5185.40 | 718 / 861 | 0% | 0 | 0 / 0 |
adipose | 26% | 590.80 | 309 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 9% | 2.23 | 7 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0000278 | Biological process | mitotic cell cycle |
GO_0000226 | Biological process | microtubule cytoskeleton organization |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005856 | Cellular component | cytoskeleton |
GO_0005829 | Cellular component | cytosol |
GO_0015630 | Cellular component | microtubule cytoskeleton |
GO_0005576 | Cellular component | extracellular region |
GO_0005874 | Cellular component | microtubule |
GO_0005737 | Cellular component | cytoplasm |
GO_0005525 | Molecular function | GTP binding |
GO_0005200 | Molecular function | structural constituent of cytoskeleton |
GO_0016787 | Molecular function | hydrolase activity |
GO_0019901 | Molecular function | protein kinase binding |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | TUBA4A |
Protein name | Tubulin alpha 4a Tubulin alpha-4A chain Tubulin alpha chain Tubulin alpha-4A chain (EC 3.6.5.-) (Alpha-tubulin 1) (Testis-specific alpha-tubulin) (Tubulin H2-alpha) (Tubulin alpha-1 chain) |
Synonyms | TUBA1 |
Description | FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . FUNCTION: Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin. . |
Accessions | ENST00000392088.6 [P68366-2] C9JDL2 ENST00000456818.5 C9JQ00 P68366 ENST00000427737.6 ENST00000398989.2 ENST00000447205.1 ENST00000425551.1 C9JJQ8 ENST00000248437.9 [P68366-1] C9JDS9 C9JEV8 |