TRAPPC2L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	16 studies	25% ± 11%	Explore
natural killer cell	14 studies	21% ± 7%	Explore
CD8-positive, alpha-beta T cell	14 studies	24% ± 5%	Explore
pericyte	14 studies	21% ± 5%	Explore
macrophage	12 studies	26% ± 10%	Explore
endothelial cell	12 studies	26% ± 12%	Explore
regulatory T cell	12 studies	22% ± 4%	Explore
ciliated cell	11 studies	30% ± 13%	Explore
CD4-positive, alpha-beta T cell	10 studies	22% ± 6%	Explore
classical monocyte	10 studies	25% ± 10%	Explore
epithelial cell	10 studies	36% ± 20%	Explore
smooth muscle cell	10 studies	23% ± 6%	Explore
T cell	9 studies	17% ± 2%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	9 studies	19% ± 4%	Explore
connective tissue cell	9 studies	23% ± 6%	Explore
B cell	8 studies	20% ± 5%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	19% ± 3%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	20% ± 3%	Explore
myofibroblast cell	8 studies	19% ± 4%	Explore
plasma cell	7 studies	32% ± 10%	Explore
non-classical monocyte	7 studies	27% ± 11%	Explore
monocyte	7 studies	18% ± 4%	Explore
mucosal invariant T cell	7 studies	18% ± 2%	Explore
plasmacytoid dendritic cell	7 studies	24% ± 8%	Explore
gamma-delta T cell	7 studies	23% ± 14%	Explore
plasmablast	6 studies	39% ± 22%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	20% ± 4%	Explore
basal cell	6 studies	30% ± 16%	Explore
mature NK T cell	6 studies	17% ± 2%	Explore
epithelial cell of proximal tubule	6 studies	25% ± 5%	Explore
abnormal cell	6 studies	31% ± 10%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	23% ± 7%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	25% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	5 studies	22% ± 4%	Explore
enterocyte	5 studies	18% ± 1%	Explore
mesothelial cell	5 studies	50% ± 15%	Explore
type II pneumocyte	5 studies	26% ± 15%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
conventional dendritic cell	4 studies	35% ± 10%	Explore
exhausted T cell	4 studies	28% ± 7%	Explore
kidney loop of Henle epithelial cell	4 studies	19% ± 2%	Explore
progenitor cell	4 studies	19% ± 2%	Explore
endothelial cell of artery	4 studies	19% ± 2%	Explore
myeloid cell	4 studies	29% ± 8%	Explore
endothelial cell of lymphatic vessel	4 studies	21% ± 8%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	23% ± 1%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	22% ± 7%	Explore
secretory cell	3 studies	26% ± 14%	Explore
pancreatic A cell	3 studies	32% ± 5%	Explore
hematopoietic precursor cell	3 studies	35% ± 8%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	20% ± 3%	Explore
capillary endothelial cell	3 studies	18% ± 2%	Explore
neural crest cell	3 studies	20% ± 1%	Explore
common myeloid progenitor	3 studies	23% ± 5%	Explore
type I pneumocyte	3 studies	26% ± 8%	Explore
erythroblast	3 studies	32% ± 15%	Explore
T follicular helper cell	3 studies	18% ± 1%	Explore
germinal center B cell	3 studies	18% ± 1%	Explore
endothelial cell of vascular tree	3 studies	18% ± 1%	Explore
intermediate monocyte	3 studies	31% ± 12%	Explore
neuron	3 studies	28% ± 16%	Explore
dendritic cell	3 studies	44% ± 11%	Explore
enteroendocrine cell	3 studies	31% ± 15%	Explore
goblet cell	3 studies	27% ± 8%	Explore
double negative thymocyte	3 studies	27% ± 11%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	22% ± 6%	Explore
kidney	7 studies	19% ± 2%	Explore
lung	6 studies	31% ± 9%	Explore
intestine	5 studies	23% ± 11%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	4696.14	258 / 258	100%	42.20	230 / 230
esophagus	100%	1551.23	1445 / 1445	100%	18.20	183 / 183
liver	100%	990.54	226 / 226	100%	22.03	406 / 406
ovary	100%	2016.69	180 / 180	100%	19.19	430 / 430
skin	100%	2016.98	1809 / 1809	100%	32.54	472 / 472
stomach	100%	1607.71	359 / 359	100%	25.42	286 / 286
thymus	100%	1752.20	653 / 653	100%	33.68	605 / 605
uterus	100%	1942.67	170 / 170	100%	30.13	459 / 459
brain	100%	2408.11	2641 / 2642	100%	36.29	705 / 705
kidney	100%	1809.29	89 / 89	100%	33.83	900 / 901
pancreas	100%	971.24	327 / 328	100%	28.65	178 / 178
intestine	100%	1630.77	966 / 966	100%	29.71	525 / 527
prostate	100%	1937.18	245 / 245	100%	29.27	500 / 502
lung	100%	1456.69	576 / 578	100%	23.84	1150 / 1155
bladder	100%	1693.24	21 / 21	99%	30.68	500 / 504
breast	100%	1723.40	459 / 459	99%	23.49	1105 / 1118
adipose	100%	1665.92	1204 / 1204	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	55.12	29 / 29
spleen	100%	2242.33	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	25.63	45 / 45
ureter	0%	0	0 / 0	100%	48.49	1 / 1
blood vessel	100%	1563.26	1333 / 1335	0%	0	0 / 0
muscle	100%	1391.93	800 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	99%	34.45	79 / 80
heart	99%	1295.15	850 / 861	0%	0	0 / 0
peripheral blood	89%	901.96	823 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0