Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 928.71 | 1445 / 1445 | 100% | 17.22 | 183 / 183 |
thymus | 100% | 1036.75 | 653 / 653 | 100% | 10.59 | 605 / 605 |
uterus | 100% | 1250.20 | 170 / 170 | 100% | 11.25 | 459 / 459 |
lung | 100% | 942.54 | 578 / 578 | 100% | 10.82 | 1153 / 1155 |
brain | 100% | 996.92 | 2641 / 2642 | 100% | 14.75 | 704 / 705 |
bladder | 100% | 1219.05 | 21 / 21 | 100% | 11.06 | 503 / 504 |
ovary | 100% | 1180.19 | 180 / 180 | 100% | 11.79 | 429 / 430 |
breast | 100% | 1137.15 | 459 / 459 | 100% | 14.29 | 1115 / 1118 |
intestine | 100% | 1027.03 | 966 / 966 | 100% | 9.80 | 525 / 527 |
prostate | 100% | 895.89 | 245 / 245 | 100% | 7.61 | 500 / 502 |
skin | 100% | 1179.16 | 1808 / 1809 | 99% | 12.13 | 469 / 472 |
pancreas | 100% | 473.40 | 327 / 328 | 99% | 9.35 | 177 / 178 |
adrenal gland | 100% | 904.60 | 258 / 258 | 99% | 12.97 | 228 / 230 |
kidney | 100% | 725.94 | 89 / 89 | 99% | 9.66 | 890 / 901 |
stomach | 100% | 727.77 | 359 / 359 | 99% | 13.12 | 282 / 286 |
liver | 100% | 395.59 | 225 / 226 | 97% | 6.49 | 394 / 406 |
adipose | 100% | 1180.03 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1366.95 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.39 | 29 / 29 |
muscle | 100% | 1456.41 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 913.96 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 10.80 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.52 | 1 / 1 |
heart | 100% | 761.11 | 859 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 7.66 | 77 / 80 |
peripheral blood | 77% | 494.52 | 719 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051123 | Biological process | RNA polymerase II preinitiation complex assembly |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0043433 | Biological process | negative regulation of DNA-binding transcription factor activity |
GO_0051457 | Biological process | maintenance of protein location in nucleus |
GO_0060261 | Biological process | positive regulation of transcription initiation by RNA polymerase II |
GO_0042789 | Biological process | mRNA transcription by RNA polymerase II |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005669 | Cellular component | transcription factor TFIID complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0001673 | Cellular component | male germ cell nucleus |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005634 | Cellular component | nucleus |
GO_0008134 | Molecular function | transcription factor binding |
GO_0140416 | Molecular function | transcription regulator inhibitor activity |
GO_0002039 | Molecular function | p53 binding |
GO_0046872 | Molecular function | metal ion binding |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0016251 | Molecular function | RNA polymerase II general transcription initiation factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | TAF3 |
Protein name | TAF3 protein Transcription initiation factor TFIID subunit 3 (140 kDa TATA box-binding protein-associated factor) (TBP-associated factor 3) (Transcription initiation factor TFIID 140 kDa subunit) (TAF(II)140) (TAF140) (TAFII-140) (TAFII140) TATA-box binding protein associated factor 3 |
Synonyms | |
Description | FUNCTION: The TFIID basal transcription factor complex plays a major role in the initiation of RNA polymerase II (Pol II)-dependent transcription . TFIID recognizes and binds promoters with or without a TATA box via its subunit TBP, a TATA-box-binding protein, and promotes assembly of the pre-initiation complex (PIC) . The TFIID complex consists of TBP and TBP-associated factors (TAFs), including TAF1, TAF2, TAF3, TAF4, TAF5, TAF6, TAF7, TAF8, TAF9, TAF10, TAF11, TAF12 and TAF13 . The TFIID complex structure can be divided into 3 modules TFIID-A, TFIID-B, and TFIID-C . TAF3 forms the TFIID-A module together with TAF5 and TBP . Required in complex with TBPL2 for the differentiation of myoblasts into myocytes . The TAF3-TBPL2 complex replaces TFIID at specific promoters at an early stage in the differentiation process . . |
Accessions | Q0VGM1 ENST00000344293.6 ENST00000686593.1 ENST00000687522.1 A0A8I5QJF0 A0A8I5KR98 Q5VWG9 |