Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
liver | 100% | 9243.30 | 226 / 226 | 100% | 109.17 | 406 / 406 |
breast | 100% | 3425.90 | 459 / 459 | 100% | 93.19 | 1117 / 1118 |
intestine | 100% | 6285.30 | 966 / 966 | 100% | 113.79 | 526 / 527 |
ovary | 100% | 2453.18 | 180 / 180 | 100% | 57.60 | 429 / 430 |
prostate | 100% | 2843.87 | 244 / 245 | 100% | 103.16 | 502 / 502 |
thymus | 100% | 2713.72 | 652 / 653 | 100% | 73.41 | 603 / 605 |
stomach | 100% | 5491.49 | 359 / 359 | 99% | 96.02 | 284 / 286 |
pancreas | 99% | 1896.48 | 325 / 328 | 100% | 70.05 | 178 / 178 |
lung | 99% | 2901.26 | 573 / 578 | 100% | 65.68 | 1153 / 1155 |
uterus | 100% | 2690.71 | 170 / 170 | 99% | 56.24 | 454 / 459 |
kidney | 100% | 6347.08 | 89 / 89 | 99% | 80.40 | 891 / 901 |
bladder | 100% | 3367.38 | 21 / 21 | 98% | 73.31 | 496 / 504 |
esophagus | 100% | 3236.42 | 1445 / 1445 | 98% | 49.41 | 180 / 183 |
skin | 100% | 3544.66 | 1803 / 1809 | 96% | 61.79 | 451 / 472 |
adrenal gland | 100% | 4431.71 | 258 / 258 | 84% | 28.95 | 194 / 230 |
brain | 79% | 1197.35 | 2094 / 2642 | 100% | 49.67 | 704 / 705 |
adipose | 100% | 3618.11 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 56.72 | 29 / 29 |
muscle | 100% | 7607.72 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2831.52 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 47.02 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.93 | 1 / 1 |
blood vessel | 100% | 3371.73 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 94% | 3592.63 | 809 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 90% | 38.10 | 72 / 80 |
peripheral blood | 52% | 1428.98 | 487 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006105 | Biological process | succinate metabolic process |
GO_1901289 | Biological process | succinyl-CoA catabolic process |
GO_0006099 | Biological process | tricarboxylic acid cycle |
GO_0006104 | Biological process | succinyl-CoA metabolic process |
GO_0045244 | Cellular component | succinate-CoA ligase complex (GDP-forming) |
GO_0005759 | Cellular component | mitochondrial matrix |
GO_0042709 | Cellular component | succinate-CoA ligase complex |
GO_0005886 | Cellular component | plasma membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0044877 | Molecular function | protein-containing complex binding |
GO_0004776 | Molecular function | succinate-CoA ligase (GDP-forming) activity |
GO_0004775 | Molecular function | succinate-CoA ligase (ADP-forming) activity |
GO_0019003 | Molecular function | GDP binding |
GO_0005525 | Molecular function | GTP binding |
GO_0005524 | Molecular function | ATP binding |
GO_0005515 | Molecular function | protein binding |
GO_0000287 | Molecular function | magnesium ion binding |
Gene name | SUCLG2 |
Protein name | Succinate-CoA ligase GDP-forming subunit beta Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (EC 6.2.1.4) (GTP-specific succinyl-CoA synthetase subunit beta) (G-SCS) (GTPSCS) (Succinyl-CoA synthetase beta-G chain) (SCS-betaG) Succinate-CoA ligase subunit beta (EC 6.2.1.-) |
Synonyms | |
Description | FUNCTION: GTP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. . |
Accessions | ENST00000493112.5 [Q96I99-2] E9PDQ8 H0Y852 ENST00000492795.1 Q96I99 ENST00000307227.10 [Q96I99-1] Q3ZCW5 ENST00000460567.5 |