RGS19 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
B cell	31 studies	30% ± 11%	Explore
conventional dendritic cell	24 studies	33% ± 16%	Explore
classical monocyte	23 studies	34% ± 16%	Explore
non-classical monocyte	23 studies	53% ± 19%	Explore
macrophage	22 studies	25% ± 11%	Explore
monocyte	19 studies	30% ± 11%	Explore
natural killer cell	18 studies	25% ± 5%	Explore
memory B cell	17 studies	33% ± 8%	Explore
CD8-positive, alpha-beta T cell	16 studies	25% ± 7%	Explore
naive B cell	16 studies	27% ± 8%	Explore
CD4-positive, alpha-beta T cell	14 studies	25% ± 7%	Explore
dendritic cell	13 studies	38% ± 22%	Explore
CD16-positive, CD56-dim natural killer cell, human	11 studies	29% ± 8%	Explore
plasmacytoid dendritic cell	11 studies	31% ± 9%	Explore
regulatory T cell	10 studies	25% ± 8%	Explore
T cell	9 studies	20% ± 5%	Explore
gamma-delta T cell	9 studies	26% ± 7%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	25% ± 5%	Explore
mucosal invariant T cell	8 studies	22% ± 3%	Explore
myeloid cell	8 studies	29% ± 10%	Explore
mature NK T cell	7 studies	25% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	24% ± 6%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	6 studies	20% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	6 studies	24% ± 5%	Explore
precursor B cell	6 studies	40% ± 12%	Explore
microglial cell	6 studies	29% ± 10%	Explore
alveolar macrophage	5 studies	19% ± 3%	Explore
immature B cell	5 studies	44% ± 18%	Explore
effector CD8-positive, alpha-beta T cell	5 studies	27% ± 6%	Explore
CD8-positive, alpha-beta memory T cell	5 studies	27% ± 10%	Explore
hematopoietic precursor cell	4 studies	29% ± 12%	Explore
neutrophil	4 studies	23% ± 7%	Explore
leukocyte	4 studies	30% ± 5%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	34% ± 6%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	33% ± 10%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	33% ± 7%	Explore
mononuclear phagocyte	3 studies	38% ± 21%	Explore
exhausted T cell	3 studies	32% ± 10%	Explore
intraepithelial lymphocyte	3 studies	17% ± 2%	Explore
germinal center B cell	3 studies	29% ± 4%	Explore
intermediate monocyte	3 studies	50% ± 23%	Explore
mast cell	3 studies	23% ± 7%	Explore
T-helper 1 cell	3 studies	24% ± 6%	Explore
T-helper 17 cell	3 studies	20% ± 4%	Explore
innate lymphoid cell	3 studies	25% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	25% ± 4%	Explore
double negative thymocyte	3 studies	23% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	13 studies	30% ± 9%	Explore
lymph node	4 studies	22% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	682.98	459 / 459	100%	34.55	1114 / 1118
lung	100%	1539.78	578 / 578	99%	33.95	1148 / 1155
thymus	100%	545.89	651 / 653	100%	27.80	603 / 605
skin	100%	564.93	1803 / 1809	100%	40.33	470 / 472
bladder	100%	612.71	21 / 21	98%	32.73	493 / 504
brain	93%	398.49	2458 / 2642	100%	34.24	705 / 705
uterus	93%	363.60	158 / 170	100%	34.67	457 / 459
prostate	98%	573.80	239 / 245	94%	11.58	472 / 502
esophagus	92%	393.78	1336 / 1445	99%	26.80	181 / 183
intestine	95%	646.34	915 / 966	89%	20.13	470 / 527
adrenal gland	100%	615.57	258 / 258	83%	13.54	190 / 230
stomach	92%	371.52	329 / 359	91%	26.52	259 / 286
kidney	89%	423.53	79 / 89	93%	22.22	839 / 901
pancreas	81%	282.86	265 / 328	97%	29.64	172 / 178
ovary	43%	124.23	77 / 180	100%	50.04	430 / 430
liver	57%	194.15	129 / 226	75%	12.95	305 / 406
adipose	100%	863.97	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	20.86	80 / 80
lymph node	0%	0	0 / 0	100%	107.88	29 / 29
peripheral blood	100%	10102.77	929 / 929	0%	0	0 / 0
spleen	100%	5600.09	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	33.82	45 / 45
ureter	0%	0	0 / 0	100%	17.10	1 / 1
blood vessel	99%	908.67	1322 / 1335	0%	0	0 / 0
heart	83%	276.25	718 / 861	0%	0	0 / 0
muscle	20%	46.99	157 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0