Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
bladder | 100% | 2771.52 | 21 / 21 | 100% | 24.17 | 504 / 504 |
esophagus | 100% | 3271.42 | 1445 / 1445 | 100% | 18.74 | 183 / 183 |
intestine | 100% | 2853.95 | 966 / 966 | 100% | 22.05 | 527 / 527 |
ovary | 100% | 2299.00 | 180 / 180 | 100% | 19.08 | 430 / 430 |
pancreas | 100% | 8688.74 | 328 / 328 | 100% | 18.94 | 178 / 178 |
skin | 100% | 3848.24 | 1809 / 1809 | 100% | 28.24 | 472 / 472 |
uterus | 100% | 2765.81 | 170 / 170 | 100% | 24.39 | 459 / 459 |
breast | 100% | 2977.75 | 459 / 459 | 100% | 25.30 | 1117 / 1118 |
lung | 100% | 2844.80 | 577 / 578 | 100% | 19.74 | 1155 / 1155 |
prostate | 100% | 2376.20 | 245 / 245 | 100% | 23.28 | 501 / 502 |
kidney | 100% | 2574.70 | 89 / 89 | 100% | 16.12 | 899 / 901 |
thymus | 100% | 2529.51 | 652 / 653 | 100% | 21.93 | 604 / 605 |
stomach | 100% | 2492.64 | 359 / 359 | 100% | 20.23 | 285 / 286 |
liver | 100% | 2083.80 | 225 / 226 | 100% | 14.69 | 406 / 406 |
brain | 99% | 2158.84 | 2622 / 2642 | 100% | 23.15 | 705 / 705 |
adrenal gland | 100% | 4358.93 | 258 / 258 | 99% | 20.09 | 228 / 230 |
adipose | 100% | 3091.03 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.79 | 29 / 29 |
muscle | 100% | 5771.20 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2934.98 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 21.58 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.06 | 1 / 1 |
blood vessel | 100% | 2920.46 | 1334 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 12.82 | 78 / 80 |
heart | 97% | 2791.97 | 837 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 2952.01 | 878 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0043161 | Biological process | proteasome-mediated ubiquitin-dependent protein catabolic process |
GO_0000502 | Cellular component | proteasome complex |
GO_1904813 | Cellular component | ficolin-1-rich granule lumen |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005576 | Cellular component | extracellular region |
GO_0005838 | Cellular component | proteasome regulatory particle |
GO_0022624 | Cellular component | proteasome accessory complex |
GO_0034774 | Cellular component | secretory granule lumen |
GO_0005515 | Molecular function | protein binding |
Gene name | PSMD6 |
Protein name | 26S proteasome non-ATPase regulatory subunit 6 (26S proteasome regulatory subunit RPN7) (26S proteasome regulatory subunit S10) (Breast cancer-associated protein SGA-113M) (Phosphonoformate immuno-associated protein 4) (Proteasome regulatory particle subunit p44S10) (p42A) Proteasome 26S subunit, non-ATPase 6 26S proteasome non-ATPase regulatory subunit 6 |
Synonyms | hCG_23509 PFAAP4 KIAA0107 |
Description | FUNCTION: Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair. . |
Accessions | ENST00000492933.5 [Q15008-4] ENST00000480205.5 ENST00000478185.1 H7C531 ENST00000295901.9 [Q15008-1] B3KT66 Q15008 C9J7B7 ENST00000394431.6 [Q15008-2] C9J0E9 ENST00000497323.5 ENST00000482510.5 [Q15008-3] |