PLEK report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
macrophage	41 studies	40% ± 15%	Explore
natural killer cell	36 studies	46% ± 16%	Explore
conventional dendritic cell	29 studies	50% ± 18%	Explore
classical monocyte	28 studies	55% ± 17%	Explore
dendritic cell	27 studies	48% ± 23%	Explore
non-classical monocyte	26 studies	60% ± 20%	Explore
plasmacytoid dendritic cell	26 studies	65% ± 19%	Explore
monocyte	22 studies	47% ± 19%	Explore
B cell	21 studies	27% ± 10%	Explore
CD16-positive, CD56-dim natural killer cell, human	16 studies	55% ± 18%	Explore
neutrophil	15 studies	50% ± 19%	Explore
CD16-negative, CD56-bright natural killer cell, human	15 studies	39% ± 14%	Explore
CD8-positive, alpha-beta T cell	14 studies	32% ± 13%	Explore
mature NK T cell	14 studies	41% ± 11%	Explore
myeloid cell	14 studies	50% ± 18%	Explore
memory B cell	13 studies	31% ± 11%	Explore
platelet	11 studies	43% ± 16%	Explore
gamma-delta T cell	11 studies	41% ± 14%	Explore
naive B cell	9 studies	20% ± 5%	Explore
mucosal invariant T cell	9 studies	27% ± 8%	Explore
microglial cell	9 studies	27% ± 11%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	30% ± 12%	Explore
leukocyte	8 studies	30% ± 8%	Explore
effector CD8-positive, alpha-beta T cell	7 studies	39% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	45% ± 17%	Explore
hematopoietic precursor cell	6 studies	41% ± 23%	Explore
mononuclear phagocyte	6 studies	45% ± 10%	Explore
megakaryocyte	6 studies	74% ± 19%	Explore
alveolar macrophage	5 studies	20% ± 3%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	42% ± 12%	Explore
plasmablast	5 studies	25% ± 8%	Explore
hematopoietic stem cell	5 studies	38% ± 14%	Explore
monocyte-derived dendritic cell	4 studies	61% ± 11%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	23% ± 8%	Explore
intermediate monocyte	4 studies	65% ± 15%	Explore
megakaryocyte-erythroid progenitor cell	4 studies	53% ± 25%	Explore
T cell	3 studies	24% ± 7%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	41% ± 22%	Explore
exhausted T cell	3 studies	41% ± 10%	Explore
common myeloid progenitor	3 studies	34% ± 8%	Explore
innate lymphoid cell	3 studies	49% ± 8%	Explore
plasma cell	3 studies	40% ± 2%	Explore
tissue-resident macrophage	3 studies	47% ± 13%	Explore
inflammatory macrophage	3 studies	52% ± 27%	Explore
germinal center B cell	3 studies	27% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	20 studies	34% ± 11%	Explore
lung	3 studies	35% ± 6%	Explore
bone marrow	3 studies	39% ± 17%	Explore
brain	3 studies	20% ± 4%	Explore
liver	3 studies	25% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	3950.35	578 / 578	94%	39.05	1085 / 1155
breast	87%	976.95	400 / 459	93%	33.27	1044 / 1118
bladder	95%	836.76	20 / 21	64%	21.08	324 / 504
intestine	82%	944.35	793 / 966	71%	19.75	373 / 527
thymus	59%	513.94	383 / 653	74%	18.26	450 / 605
stomach	49%	423.92	177 / 359	78%	28.44	223 / 286
kidney	42%	371.46	37 / 89	84%	30.39	758 / 901
brain	40%	394.80	1069 / 2642	83%	22.46	583 / 705
esophagus	51%	417.53	743 / 1445	70%	13.76	129 / 183
uterus	39%	241.54	66 / 170	75%	19.34	342 / 459
adrenal gland	75%	646.46	194 / 258	30%	4.24	70 / 230
liver	56%	409.35	126 / 226	49%	10.39	199 / 406
skin	20%	109.93	357 / 1809	83%	36.29	390 / 472
lymph node	0%	0	0 / 0	100%	362.07	29 / 29
peripheral blood	100%	27673.58	929 / 929	0%	0	0 / 0
spleen	100%	9459.80	241 / 241	0%	0	0 / 0
ovary	21%	132.18	38 / 180	77%	16.66	333 / 430
prostate	46%	335.76	113 / 245	52%	7.47	262 / 502
adipose	97%	2000.80	1170 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	91%	53.39	41 / 45
pancreas	10%	59.61	33 / 328	79%	19.80	140 / 178
blood vessel	57%	675.60	759 / 1335	0%	0	0 / 0
heart	37%	243.25	317 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	21%	3.77	17 / 80
muscle	7%	32.64	53 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1