ODF2L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	37 studies	29% ± 10%	Explore
CD4-positive, alpha-beta T cell	25 studies	25% ± 8%	Explore
T cell	23 studies	25% ± 7%	Explore
endothelial cell of lymphatic vessel	22 studies	35% ± 10%	Explore
fibroblast	21 studies	24% ± 7%	Explore
ciliated cell	20 studies	68% ± 14%	Explore
natural killer cell	19 studies	20% ± 4%	Explore
regulatory T cell	19 studies	24% ± 5%	Explore
CD8-positive, alpha-beta T cell	16 studies	25% ± 9%	Explore
gamma-delta T cell	15 studies	27% ± 10%	Explore
mucosal invariant T cell	14 studies	31% ± 6%	Explore
club cell	11 studies	29% ± 15%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	20% ± 6%	Explore
vein endothelial cell	11 studies	23% ± 13%	Explore
mature NK T cell	10 studies	25% ± 6%	Explore
capillary endothelial cell	10 studies	22% ± 8%	Explore
CD8-positive, alpha-beta memory T cell	9 studies	26% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	9 studies	23% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell	9 studies	26% ± 11%	Explore
glutamatergic neuron	9 studies	52% ± 24%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	21% ± 7%	Explore
endothelial cell of artery	8 studies	19% ± 3%	Explore
epithelial cell	8 studies	33% ± 20%	Explore
adipocyte	8 studies	26% ± 10%	Explore
endothelial cell of vascular tree	8 studies	23% ± 12%	Explore
type I pneumocyte	8 studies	25% ± 6%	Explore
CD4-positive, alpha-beta memory T cell	7 studies	23% ± 5%	Explore
retinal rod cell	7 studies	32% ± 8%	Explore
astrocyte	7 studies	29% ± 11%	Explore
GABAergic neuron	7 studies	50% ± 20%	Explore
B cell	6 studies	23% ± 4%	Explore
neuron	6 studies	34% ± 11%	Explore
amacrine cell	6 studies	30% ± 12%	Explore
interneuron	6 studies	43% ± 24%	Explore
retinal cone cell	6 studies	42% ± 12%	Explore
type II pneumocyte	6 studies	18% ± 3%	Explore
oligodendrocyte	6 studies	26% ± 6%	Explore
goblet cell	6 studies	32% ± 16%	Explore
basal cell	6 studies	31% ± 13%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	5 studies	22% ± 8%	Explore
retinal bipolar neuron	5 studies	28% ± 9%	Explore
lymphocyte	5 studies	29% ± 8%	Explore
respiratory goblet cell	5 studies	41% ± 17%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	31% ± 9%	Explore
T follicular helper cell	5 studies	25% ± 6%	Explore
deuterosomal cell	4 studies	52% ± 6%	Explore
oligodendrocyte precursor cell	4 studies	20% ± 4%	Explore
ON-bipolar cell	4 studies	35% ± 12%	Explore
retinal ganglion cell	4 studies	39% ± 15%	Explore
pericyte	4 studies	20% ± 2%	Explore
retina horizontal cell	4 studies	25% ± 8%	Explore
mesothelial cell	4 studies	23% ± 6%	Explore
secretory cell	4 studies	26% ± 9%	Explore
CD4-positive helper T cell	4 studies	30% ± 12%	Explore
innate lymphoid cell	4 studies	30% ± 6%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	19% ± 2%	Explore
connective tissue cell	4 studies	24% ± 6%	Explore
smooth muscle cell	4 studies	17% ± 1%	Explore
pancreatic A cell	3 studies	33% ± 13%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	23% ± 4%	Explore
leukocyte	3 studies	22% ± 2%	Explore
naive B cell	3 studies	16% ± 1%	Explore
GABAergic interneuron	3 studies	32% ± 7%	Explore
macrophage	3 studies	28% ± 8%	Explore
microglial cell	3 studies	21% ± 6%	Explore
progenitor cell	3 studies	22% ± 4%	Explore
squamous epithelial cell	3 studies	38% ± 28%	Explore
Mueller cell	3 studies	25% ± 6%	Explore
OFF-bipolar cell	3 studies	23% ± 6%	Explore
rod bipolar cell	3 studies	26% ± 10%	Explore
ependymal cell	3 studies	54% ± 8%	Explore
group 3 innate lymphoid cell	3 studies	36% ± 7%	Explore
T-helper 17 cell	3 studies	43% ± 16%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	22% ± 2%	Explore
double negative thymocyte	3 studies	28% ± 13%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	14 studies	23% ± 8%	Explore
brain	12 studies	36% ± 20%	Explore
eye	8 studies	28% ± 8%	Explore
peripheral blood	7 studies	20% ± 5%	Explore
intestine	5 studies	22% ± 6%	Explore
adipose	4 studies	24% ± 6%	Explore
liver	3 studies	22% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3065.05	459 / 459	99%	10.81	1108 / 1118
uterus	100%	2529.05	170 / 170	99%	12.34	454 / 459
lung	100%	3329.25	578 / 578	99%	10.12	1141 / 1155
thymus	100%	3131.24	653 / 653	99%	9.91	597 / 605
bladder	100%	1769.10	21 / 21	97%	10.29	490 / 504
ovary	100%	2496.89	180 / 180	97%	6.73	415 / 430
esophagus	100%	1437.05	1443 / 1445	96%	8.28	175 / 183
prostate	100%	2439.02	245 / 245	94%	5.16	474 / 502
pancreas	96%	764.28	314 / 328	98%	7.92	174 / 178
intestine	100%	2132.57	966 / 966	90%	5.24	474 / 527
kidney	100%	1916.71	89 / 89	89%	5.92	802 / 901
brain	98%	1505.93	2591 / 2642	90%	4.00	634 / 705
skin	100%	1641.80	1805 / 1809	85%	6.64	401 / 472
adrenal gland	100%	2045.07	258 / 258	79%	3.11	181 / 230
stomach	90%	845.89	322 / 359	87%	5.04	249 / 286
adipose	100%	2611.49	1204 / 1204	0%	0	0 / 0
spleen	100%	3969.28	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	9.10	45 / 45
ureter	0%	0	0 / 0	100%	8.40	1 / 1
blood vessel	98%	1144.01	1304 / 1335	0%	0	0 / 0
heart	98%	988.60	840 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	83%	3.53	24 / 29
liver	56%	298.27	126 / 226	22%	1.11	90 / 406
peripheral blood	59%	552.27	544 / 929	0%	0	0 / 0
muscle	47%	245.47	376 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	41%	2.23	33 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0