LBH report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	35 studies	33% ± 13%	Explore
B cell	32 studies	32% ± 12%	Explore
CD8-positive, alpha-beta T cell	29 studies	35% ± 12%	Explore
smooth muscle cell	28 studies	39% ± 15%	Explore
CD4-positive, alpha-beta T cell	26 studies	37% ± 13%	Explore
regulatory T cell	25 studies	41% ± 15%	Explore
pericyte	23 studies	46% ± 17%	Explore
T cell	22 studies	32% ± 12%	Explore
fibroblast	20 studies	37% ± 18%	Explore
naive B cell	20 studies	34% ± 9%	Explore
mature NK T cell	18 studies	34% ± 12%	Explore
memory B cell	18 studies	33% ± 9%	Explore
gamma-delta T cell	16 studies	37% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	38% ± 9%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	14 studies	44% ± 9%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	39% ± 12%	Explore
mucosal invariant T cell	13 studies	38% ± 12%	Explore
CD8-positive, alpha-beta memory T cell	12 studies	36% ± 10%	Explore
effector memory CD8-positive, alpha-beta T cell	11 studies	37% ± 10%	Explore
myofibroblast cell	11 studies	36% ± 9%	Explore
endothelial cell	11 studies	28% ± 8%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	34% ± 12%	Explore
T follicular helper cell	8 studies	42% ± 8%	Explore
retinal cone cell	8 studies	61% ± 25%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	38% ± 17%	Explore
ciliated cell	8 studies	32% ± 13%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	31% ± 9%	Explore
connective tissue cell	6 studies	38% ± 15%	Explore
type I pneumocyte	5 studies	27% ± 8%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	37% ± 12%	Explore
exhausted T cell	5 studies	43% ± 13%	Explore
effector CD4-positive, alpha-beta T cell	5 studies	32% ± 11%	Explore
basal cell	5 studies	23% ± 5%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	29% ± 7%	Explore
CD4-positive helper T cell	4 studies	24% ± 6%	Explore
central memory CD8-positive, alpha-beta T cell	4 studies	31% ± 11%	Explore
precursor B cell	4 studies	29% ± 15%	Explore
immature B cell	4 studies	43% ± 16%	Explore
retinal pigment epithelial cell	4 studies	29% ± 10%	Explore
GABAergic neuron	4 studies	21% ± 4%	Explore
double negative thymocyte	4 studies	34% ± 6%	Explore
pancreatic A cell	3 studies	23% ± 4%	Explore
epithelial cell	3 studies	23% ± 5%	Explore
cardiac muscle cell	3 studies	18% ± 3%	Explore
abnormal cell	3 studies	34% ± 9%	Explore
innate lymphoid cell	3 studies	28% ± 9%	Explore
luminal cell of prostate epithelium	3 studies	22% ± 3%	Explore
T-helper 17 cell	3 studies	27% ± 1%	Explore
T-helper 1 cell	3 studies	32% ± 12%	Explore
erythrocyte	3 studies	29% ± 8%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	35% ± 13%	Explore
secretory cell	3 studies	28% ± 10%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	17 studies	25% ± 5%	Explore
lung	8 studies	25% ± 8%	Explore
intestine	4 studies	18% ± 2%	Explore
kidney	3 studies	29% ± 8%	Explore
uterus	3 studies	19% ± 3%	Explore
liver	3 studies	26% ± 5%	Explore
lymph node	3 studies	36% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	10422.50	653 / 653	100%	189.52	604 / 605
lung	100%	18134.52	578 / 578	97%	96.51	1118 / 1155
prostate	98%	4090.10	241 / 245	98%	127.78	491 / 502
ovary	99%	8589.17	178 / 180	96%	67.08	411 / 430
uterus	99%	9382.28	169 / 170	91%	63.73	419 / 459
breast	95%	4792.66	435 / 459	95%	51.63	1062 / 1118
kidney	97%	4817.98	86 / 89	91%	82.28	823 / 901
intestine	91%	3994.51	882 / 966	85%	42.20	448 / 527
bladder	81%	3569.57	17 / 21	87%	53.61	440 / 504
stomach	75%	2335.95	268 / 359	86%	42.80	247 / 286
skin	83%	3302.48	1494 / 1809	76%	42.05	360 / 472
esophagus	79%	6077.37	1135 / 1445	80%	38.79	146 / 183
pancreas	20%	401.78	65 / 328	97%	104.15	173 / 178
adrenal gland	42%	913.05	109 / 258	74%	52.87	171 / 230
lymph node	0%	0	0 / 0	100%	138.77	29 / 29
spleen	100%	11761.34	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	59.43	1 / 1
blood vessel	100%	14073.60	1331 / 1335	0%	0	0 / 0
brain	33%	848.13	862 / 2642	66%	29.34	465 / 705
tonsil	0%	0	0 / 0	98%	61.77	44 / 45
adipose	95%	4339.51	1142 / 1204	0%	0	0 / 0
heart	92%	6244.76	789 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	81%	30.73	65 / 80
peripheral blood	79%	2973.12	736 / 929	0%	0	0 / 0
liver	27%	599.65	62 / 226	41%	18.17	166 / 406
muscle	26%	548.73	206 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0