Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 7184.36 | 327 / 328 | 93% | 168.34 | 166 / 178 |
lung | 90% | 7397.70 | 523 / 578 | 93% | 90.48 | 1071 / 1155 |
stomach | 75% | 8214.10 | 271 / 359 | 98% | 152.00 | 280 / 286 |
prostate | 90% | 9163.49 | 221 / 245 | 80% | 44.76 | 402 / 502 |
bladder | 71% | 17431.19 | 15 / 21 | 90% | 150.27 | 456 / 504 |
kidney | 100% | 6701.13 | 89 / 89 | 58% | 41.15 | 523 / 901 |
breast | 62% | 13006.34 | 284 / 459 | 93% | 62.75 | 1040 / 1118 |
intestine | 52% | 8862.73 | 502 / 966 | 98% | 173.57 | 515 / 527 |
liver | 88% | 4141.88 | 198 / 226 | 51% | 27.94 | 206 / 406 |
esophagus | 40% | 7589.54 | 575 / 1445 | 83% | 98.63 | 152 / 183 |
ureter | 0% | 0 | 0 / 0 | 100% | 146.61 | 1 / 1 |
ovary | 2% | 54.39 | 4 / 180 | 97% | 108.77 | 416 / 430 |
uterus | 11% | 558.26 | 18 / 170 | 81% | 111.94 | 372 / 459 |
tonsil | 0% | 0 | 0 / 0 | 80% | 78.90 | 36 / 45 |
thymus | 23% | 484.25 | 148 / 653 | 31% | 11.76 | 188 / 605 |
skin | 43% | 891.79 | 771 / 1809 | 0% | 0.10 | 2 / 472 |
heart | 4% | 137.72 | 35 / 861 | 0% | 0 | 0 / 0 |
adipose | 2% | 40.72 | 23 / 1204 | 0% | 0 | 0 / 0 |
spleen | 0% | 4.10 | 1 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 10.33 | 1 / 258 | 0% | 0 | 0 / 230 |
peripheral blood | 0% | 23.48 | 3 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 2.74 | 1 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 1.37 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
brain | 0% | 0 | 0 / 2642 | 0% | 0 | 0 / 705 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006954 | Biological process | inflammatory response |
GO_0006357 | Biological process | regulation of transcription by RNA polymerase II |
GO_0030198 | Biological process | extracellular matrix organization |
GO_0060056 | Biological process | mammary gland involution |
GO_0030154 | Biological process | cell differentiation |
GO_0001824 | Biological process | blastocyst development |
GO_0045892 | Biological process | negative regulation of DNA-templated transcription |
GO_0045944 | Biological process | positive regulation of transcription by RNA polymerase II |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0005829 | Cellular component | cytosol |
GO_0000785 | Cellular component | chromatin |
GO_0005634 | Cellular component | nucleus |
GO_0000978 | Molecular function | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
GO_0001228 | Molecular function | DNA-binding transcription activator activity, RNA polymerase II-specific |
GO_0000981 | Molecular function | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO_1990837 | Molecular function | sequence-specific double-stranded DNA binding |
GO_0003700 | Molecular function | DNA-binding transcription factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | ELF3 |
Protein name | E74-like ETS transcription factor 3 isoform 12 E74-like ETS transcription factor 3 isoform 16 E74-like ETS transcription factor 3 isoform 13 E74-like ETS transcription factor 3 isoform 17 E74 like ETS transcription factor 3 E74-like ETS transcription factor 3 isoform 15 E74-like ETS transcription factor 3 isoform 19 E74-like ETS transcription factor 3 isoform 3 (E74-like ETS transcription factor 3 isoform 6) E74-like ETS transcription factor 3 isoform 18 E74-like ETS transcription factor 3 isoform 5 E74-like ETS transcription factor 3 isoform 2 E74-like ETS transcription factor 3 isoform 20 E74-like ETS transcription factor 3 isoform 11 E74-like ETS transcription factor 3 isoform 14 E74-like ETS transcription factor 3 isoform 7 E74-like ETS transcription factor 3 isoform 8 ETS-related transcription factor Elf-3 (E74-like factor 3) (Epithelial-restricted with serine box) (Epithelium-restricted Ets protein ESX) (Epithelium-specific Ets transcription factor 1) (ESE-1) E74-like ETS transcription factor 3 isoform 9 E74-like ETS transcription factor 3 isoform 4 E74-like ETS transcription factor 3 isoform 10 |
Synonyms | ESX JEN ERT |
Description | FUNCTION: Transcriptional activator that binds and transactivates ETS sequences containing the consensus nucleotide core sequence GGA[AT]. Acts synergistically with POU2F3 to transactivate the SPRR2A promoter and with RUNX1 to transactivate the ANGPT1 promoter. Also transactivates collagenase, CCL20, CLND7, FLG, KRT8, NOS2, PTGS2, SPRR2B, TGFBR2 and TGM3 promoters. Represses KRT4 promoter activity. Involved in mediating vascular inflammation. May play an important role in epithelial cell differentiation and tumorigenesis. May be a critical downstream effector of the ERBB2 signaling pathway. May be associated with mammary gland development and involution. Plays an important role in the regulation of transcription with TATA-less promoters in preimplantation embryos, which is essential in preimplantation development (By similarity). . |
Accessions | A0A8E8V1S5 A0A8E8R7S3 A0A8E8V2N5 A0A8E8V181 ENST00000446188.1 A0A8E8R9U5 A0A8E8RB67 A0A8E8R7T2 ENST00000367284.10 [P78545-1] A0A8E8R9T1 A0A8E8V174 ENST00000367283.7 [P78545-1] A0A8E8V1H0 A0A8E8V1G0 A0A8E8R9M4 A0A8E8V2S2 A0A8E8R9N5 Q5SR36 ENST00000359651.7 [P78545-1] P78545 A0A8E8R951 A0A8E8V1T0 A0A8E8R9M5 A0A8E8R776 |