CLTB | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	28 studies	29% ± 13%	Explore
fibroblast	28 studies	30% ± 13%	Explore
smooth muscle cell	23 studies	30% ± 9%	Explore
pericyte	22 studies	28% ± 8%	Explore
natural killer cell	20 studies	23% ± 7%	Explore
conventional dendritic cell	19 studies	29% ± 14%	Explore
basal cell	19 studies	38% ± 14%	Explore
epithelial cell	18 studies	41% ± 20%	Explore
classical monocyte	17 studies	25% ± 11%	Explore
regulatory T cell	17 studies	21% ± 4%	Explore
T cell	16 studies	20% ± 5%	Explore
macrophage	15 studies	22% ± 9%	Explore
endothelial cell of lymphatic vessel	14 studies	28% ± 10%	Explore
non-classical monocyte	14 studies	31% ± 16%	Explore
connective tissue cell	14 studies	29% ± 7%	Explore
CD4-positive, alpha-beta T cell	13 studies	20% ± 6%	Explore
CD8-positive, alpha-beta T cell	13 studies	23% ± 7%	Explore
capillary endothelial cell	12 studies	24% ± 4%	Explore
gamma-delta T cell	12 studies	24% ± 10%	Explore
monocyte	10 studies	23% ± 6%	Explore
endothelial cell of artery	10 studies	28% ± 5%	Explore
goblet cell	10 studies	35% ± 11%	Explore
myofibroblast cell	10 studies	28% ± 10%	Explore
vein endothelial cell	10 studies	22% ± 6%	Explore
dendritic cell	10 studies	36% ± 25%	Explore
ciliated cell	9 studies	33% ± 15%	Explore
secretory cell	9 studies	37% ± 17%	Explore
endothelial cell of vascular tree	9 studies	28% ± 7%	Explore
CD16-positive, CD56-dim natural killer cell, human	8 studies	27% ± 4%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	23% ± 3%	Explore
mature NK T cell	8 studies	20% ± 3%	Explore
plasmacytoid dendritic cell	8 studies	26% ± 8%	Explore
mast cell	7 studies	18% ± 2%	Explore
type I pneumocyte	7 studies	37% ± 12%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	25% ± 8%	Explore
club cell	7 studies	31% ± 7%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	7 studies	20% ± 5%	Explore
enterocyte	7 studies	45% ± 16%	Explore
T follicular helper cell	7 studies	19% ± 2%	Explore
respiratory goblet cell	6 studies	36% ± 16%	Explore
B cell	6 studies	21% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	24% ± 6%	Explore
neuron	6 studies	41% ± 15%	Explore
mesothelial cell	6 studies	42% ± 14%	Explore
transit amplifying cell	6 studies	27% ± 10%	Explore
mucosal invariant T cell	6 studies	19% ± 2%	Explore
CD4-positive, alpha-beta memory T cell	5 studies	23% ± 6%	Explore
epithelial cell of proximal tubule	5 studies	20% ± 3%	Explore
amacrine cell	5 studies	45% ± 20%	Explore
innate lymphoid cell	5 studies	20% ± 4%	Explore
myeloid cell	5 studies	25% ± 11%	Explore
plasma cell	5 studies	31% ± 12%	Explore
retina horizontal cell	5 studies	52% ± 25%	Explore
squamous epithelial cell	4 studies	59% ± 17%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	22% ± 6%	Explore
leukocyte	4 studies	26% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	18% ± 3%	Explore
mononuclear phagocyte	4 studies	35% ± 13%	Explore
glutamatergic neuron	4 studies	42% ± 24%	Explore
OFF-bipolar cell	4 studies	60% ± 28%	Explore
ON-bipolar cell	4 studies	55% ± 30%	Explore
retinal ganglion cell	4 studies	87% ± 17%	Explore
abnormal cell	4 studies	27% ± 5%	Explore
progenitor cell	4 studies	34% ± 12%	Explore
adventitial cell	4 studies	27% ± 9%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	24% ± 8%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	32% ± 7%	Explore
keratinocyte	4 studies	60% ± 23%	Explore
plasmablast	3 studies	53% ± 8%	Explore
pancreatic A cell	3 studies	36% ± 21%	Explore
exhausted T cell	3 studies	30% ± 13%	Explore
hematopoietic precursor cell	3 studies	31% ± 5%	Explore
glomerular endothelial cell	3 studies	22% ± 2%	Explore
kidney loop of Henle epithelial cell	3 studies	18% ± 1%	Explore
retinal bipolar neuron	3 studies	65% ± 17%	Explore
GABAergic amacrine cell	3 studies	43% ± 16%	Explore
extravillous trophoblast	3 studies	42% ± 27%	Explore
placental villous trophoblast	3 studies	26% ± 8%	Explore
lymphocyte	3 studies	26% ± 9%	Explore
astrocyte	3 studies	30% ± 9%	Explore
mucus secreting cell	3 studies	28% ± 1%	Explore
serous secreting cell	3 studies	27% ± 6%	Explore
intraepithelial lymphocyte	3 studies	21% ± 3%	Explore
Mueller cell	3 studies	26% ± 5%	Explore
rod bipolar cell	3 studies	47% ± 19%	Explore
myoepithelial cell	3 studies	42% ± 8%	Explore
GABAergic neuron	3 studies	41% ± 16%	Explore
enteroendocrine cell	3 studies	36% ± 15%	Explore
T-helper 17 cell	3 studies	18% ± 2%	Explore
progenitor cell of mammary luminal epithelium	3 studies	23% ± 2%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	15 studies	27% ± 13%	Explore
peripheral blood	10 studies	25% ± 8%	Explore
intestine	10 studies	27% ± 13%	Explore
eye	7 studies	33% ± 11%	Explore
kidney	5 studies	21% ± 3%	Explore
brain	5 studies	29% ± 12%	Explore
uterus	4 studies	30% ± 7%	Explore
breast	4 studies	27% ± 4%	Explore
liver	4 studies	22% ± 8%	Explore
pancreas	3 studies	35% ± 18%	Explore
placenta	3 studies	27% ± 7%	Explore
prostate	3 studies	33% ± 10%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	100%	6750.11	258 / 258	100%	217.35	230 / 230
esophagus	100%	12084.93	1445 / 1445	100%	213.21	183 / 183
uterus	100%	4503.78	170 / 170	100%	280.02	459 / 459
thymus	99%	4081.22	649 / 653	100%	156.52	605 / 605
skin	100%	15949.99	1808 / 1809	99%	127.20	469 / 472
ovary	100%	5272.10	180 / 180	99%	107.63	427 / 430
intestine	100%	6361.27	966 / 966	99%	212.75	523 / 527
brain	99%	6679.25	2618 / 2642	100%	138.59	705 / 705
kidney	100%	4197.25	89 / 89	99%	86.65	891 / 901
stomach	99%	5070.20	357 / 359	99%	182.52	284 / 286
prostate	99%	4739.06	243 / 245	99%	120.05	498 / 502
bladder	100%	5476.76	21 / 21	98%	195.87	495 / 504
lung	99%	5045.54	572 / 578	98%	131.16	1137 / 1155
breast	100%	4415.36	458 / 459	97%	105.19	1083 / 1118
liver	84%	2140.16	190 / 226	100%	102.64	405 / 406
pancreas	70%	1584.39	231 / 328	99%	339.16	177 / 178
eye	0%	0	0 / 0	100%	142.90	80 / 80
lymph node	0%	0	0 / 0	100%	149.59	29 / 29
muscle	100%	9583.42	803 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	310.90	45 / 45
ureter	0%	0	0 / 0	100%	416.55	1 / 1
adipose	100%	4962.33	1200 / 1204	0%	0	0 / 0
blood vessel	100%	6630.18	1330 / 1335	0%	0	0 / 0
spleen	100%	3502.28	240 / 241	0%	0	0 / 0
heart	98%	8978.25	848 / 861	0%	0	0 / 0
peripheral blood	74%	2066.87	692 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0006886	Biological process	intracellular protein transport
GO_0072583	Biological process	clathrin-dependent endocytosis
GO_0030125	Cellular component	clathrin vesicle coat
GO_0099631	Cellular component	postsynaptic endocytic zone cytoplasmic component
GO_0005886	Cellular component	plasma membrane
GO_0030118	Cellular component	clathrin coat
GO_0030672	Cellular component	synaptic vesicle membrane
GO_0060170	Cellular component	ciliary membrane
GO_0005802	Cellular component	trans-Golgi network
GO_0030130	Cellular component	clathrin coat of trans-Golgi network vesicle
GO_0098835	Cellular component	presynaptic endocytic zone membrane
GO_0005829	Cellular component	cytosol
GO_0030132	Cellular component	clathrin coat of coated pit
GO_0045334	Cellular component	clathrin-coated endocytic vesicle
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0042277	Molecular function	peptide binding
GO_0032050	Molecular function	clathrin heavy chain binding
GO_0005198	Molecular function	structural molecule activity
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	CLTB
Protein name	Clathrin light chain B (Lcb) Clathrin light chain
Synonyms
Description	FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. . FUNCTION: Clathrin is the major protein of the polyhedral coat of coated pits and vesicles. .
Accessions	ENST00000502877.1 ENST00000345807.7 [P09497-2] ENST00000508425.5 P09497 ENST00000310418.9 [P09497-1] ENST00000510734.5 B4DTF9 D6RJD1 H0Y9Q6

CLTB report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review