Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 2195.69 | 1445 / 1445 | 100% | 55.27 | 183 / 183 |
intestine | 100% | 2204.10 | 966 / 966 | 98% | 22.24 | 519 / 527 |
stomach | 100% | 2493.01 | 359 / 359 | 97% | 30.05 | 278 / 286 |
pancreas | 100% | 1672.67 | 327 / 328 | 96% | 17.35 | 170 / 178 |
kidney | 100% | 1716.89 | 89 / 89 | 89% | 13.58 | 805 / 901 |
skin | 100% | 4032.78 | 1809 / 1809 | 88% | 28.74 | 417 / 472 |
brain | 95% | 1063.16 | 2523 / 2642 | 92% | 20.92 | 646 / 705 |
adrenal gland | 100% | 3203.40 | 258 / 258 | 86% | 13.03 | 198 / 230 |
lung | 100% | 2167.93 | 577 / 578 | 85% | 20.09 | 983 / 1155 |
prostate | 99% | 1483.98 | 243 / 245 | 81% | 11.06 | 408 / 502 |
uterus | 99% | 1387.62 | 169 / 170 | 73% | 11.53 | 336 / 459 |
breast | 100% | 1630.09 | 458 / 459 | 70% | 10.52 | 787 / 1118 |
bladder | 100% | 1750.43 | 21 / 21 | 65% | 11.40 | 328 / 504 |
ovary | 99% | 1204.09 | 179 / 180 | 61% | 6.83 | 261 / 430 |
liver | 99% | 1148.61 | 224 / 226 | 60% | 8.10 | 242 / 406 |
thymus | 99% | 1170.26 | 649 / 653 | 54% | 9.39 | 329 / 605 |
spleen | 100% | 1785.05 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.17 | 1 / 1 |
blood vessel | 100% | 2367.55 | 1332 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 1826.72 | 1201 / 1204 | 0% | 0 | 0 / 0 |
heart | 98% | 1235.43 | 846 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 97% | 16.71 | 28 / 29 |
tonsil | 0% | 0 | 0 / 0 | 78% | 15.42 | 35 / 45 |
peripheral blood | 69% | 2600.10 | 637 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 46% | 4.12 | 37 / 80 |
muscle | 29% | 152.46 | 229 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0045638 | Biological process | negative regulation of myeloid cell differentiation |
GO_0010468 | Biological process | regulation of gene expression |
GO_0008285 | Biological process | negative regulation of cell population proliferation |
GO_0048146 | Biological process | positive regulation of fibroblast proliferation |
GO_0045786 | Biological process | negative regulation of cell cycle |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0007165 | Biological process | signal transduction |
GO_0009615 | Biological process | response to virus |
GO_2000773 | Biological process | negative regulation of cellular senescence |
GO_0010628 | Biological process | positive regulation of gene expression |
GO_0001954 | Biological process | positive regulation of cell-matrix adhesion |
GO_0021542 | Biological process | dentate gyrus development |
GO_0043697 | Biological process | cell dedifferentiation |
GO_0051301 | Biological process | cell division |
GO_0010389 | Biological process | regulation of G2/M transition of mitotic cell cycle |
GO_0000122 | Biological process | negative regulation of transcription by RNA polymerase II |
GO_0050680 | Biological process | negative regulation of epithelial cell proliferation |
GO_0033077 | Biological process | T cell differentiation in thymus |
GO_0060218 | Biological process | hematopoietic stem cell differentiation |
GO_0048699 | Biological process | generation of neurons |
GO_0045656 | Biological process | negative regulation of monocyte differentiation |
GO_0045646 | Biological process | regulation of erythrocyte differentiation |
GO_1902036 | Biological process | regulation of hematopoietic stem cell differentiation |
GO_0042063 | Biological process | gliogenesis |
GO_0045668 | Biological process | negative regulation of osteoblast differentiation |
GO_0021670 | Biological process | lateral ventricle development |
GO_0003323 | Biological process | type B pancreatic cell development |
GO_2000145 | Biological process | regulation of cell motility |
GO_0045596 | Biological process | negative regulation of cell differentiation |
GO_0014002 | Biological process | astrocyte development |
GO_0006468 | Biological process | protein phosphorylation |
GO_0051726 | Biological process | regulation of cell cycle |
GO_0000082 | Biological process | G1/S transition of mitotic cell cycle |
GO_0001726 | Cellular component | ruffle |
GO_0097131 | Cellular component | cyclin D1-CDK6 complex |
GO_0097132 | Cellular component | cyclin D2-CDK6 complex |
GO_0005813 | Cellular component | centrosome |
GO_0097133 | Cellular component | cyclin D3-CDK6 complex |
GO_0005654 | Cellular component | nucleoplasm |
GO_0000307 | Cellular component | cyclin-dependent protein kinase holoenzyme complex |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0106310 | Molecular function | protein serine kinase activity |
GO_0098770 | Molecular function | FBXO family protein binding |
GO_0005524 | Molecular function | ATP binding |
GO_0030332 | Molecular function | cyclin binding |
GO_0005515 | Molecular function | protein binding |
GO_0004693 | Molecular function | cyclin-dependent protein serine/threonine kinase activity |
Gene name | CDK6 |
Protein name | Cyclin-dependent kinase 6 (EC 2.7.11.22) (Cell division protein kinase 6) (Serine/threonine-protein kinase PLSTIRE) |
Synonyms | CDKN6 |
Description | FUNCTION: Serine/threonine-protein kinase involved in the control of the cell cycle and differentiation; promotes G1/S transition. Phosphorylates pRB/RB1 and NPM1. Interacts with D-type G1 cyclins during interphase at G1 to form a pRB/RB1 kinase and controls the entrance into the cell cycle. Involved in initiation and maintenance of cell cycle exit during cell differentiation; prevents cell proliferation and negatively regulates cell differentiation, but is required for the proliferation of specific cell types (e.g. erythroid and hematopoietic cells). Essential for cell proliferation within the dentate gyrus of the hippocampus and the subventricular zone of the lateral ventricles. Required during thymocyte development. Promotes the production of newborn neurons, probably by modulating G1 length. Promotes, at least in astrocytes, changes in patterns of gene expression, changes in the actin cytoskeleton including loss of stress fibers, and enhanced motility during cell differentiation. Prevents myeloid differentiation by interfering with RUNX1 and reducing its transcription transactivation activity, but promotes proliferation of normal myeloid progenitors. Delays senescence. Promotes the proliferation of beta-cells in pancreatic islets of Langerhans. May play a role in the centrosome organization during the cell cycle phases . . |
Accessions | Q00534 ENST00000265734.8 ENST00000424848.3 |