Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 100% | 2931.03 | 2642 / 2642 | 100% | 64.10 | 705 / 705 |
| breast | 100% | 1436.50 | 459 / 459 | 100% | 47.50 | 1118 / 1118 |
| liver | 100% | 1203.84 | 226 / 226 | 100% | 26.99 | 406 / 406 |
| ovary | 100% | 996.46 | 180 / 180 | 100% | 24.22 | 430 / 430 |
| uterus | 100% | 924.91 | 170 / 170 | 100% | 55.19 | 459 / 459 |
| esophagus | 100% | 1605.19 | 1443 / 1445 | 100% | 35.67 | 183 / 183 |
| lung | 100% | 1838.76 | 577 / 578 | 100% | 45.88 | 1155 / 1155 |
| prostate | 100% | 1413.60 | 245 / 245 | 100% | 35.18 | 501 / 502 |
| kidney | 100% | 1664.96 | 89 / 89 | 100% | 36.54 | 899 / 901 |
| thymus | 100% | 1427.44 | 652 / 653 | 100% | 54.40 | 604 / 605 |
| adrenal gland | 100% | 1891.58 | 258 / 258 | 100% | 52.22 | 229 / 230 |
| bladder | 100% | 1133.29 | 21 / 21 | 99% | 41.41 | 501 / 504 |
| intestine | 100% | 1047.08 | 966 / 966 | 99% | 27.63 | 521 / 527 |
| skin | 100% | 2220.34 | 1808 / 1809 | 99% | 38.39 | 466 / 472 |
| stomach | 100% | 974.45 | 359 / 359 | 99% | 26.40 | 282 / 286 |
| pancreas | 97% | 801.77 | 318 / 328 | 100% | 37.73 | 178 / 178 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 68.93 | 29 / 29 |
| spleen | 100% | 2477.79 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 52.36 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 30.28 | 1 / 1 |
| adipose | 100% | 1463.48 | 1203 / 1204 | 0% | 0 | 0 / 0 |
| muscle | 100% | 2455.59 | 802 / 803 | 0% | 0 | 0 / 0 |
| blood vessel | 99% | 1010.87 | 1317 / 1335 | 0% | 0 | 0 / 0 |
| heart | 96% | 877.20 | 829 / 861 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 96% | 28.01 | 77 / 80 |
| peripheral blood | 91% | 1500.30 | 843 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0051036 | Biological process | regulation of endosome size |
| GO_0062196 | Biological process | regulation of lysosome size |
| GO_0031175 | Biological process | neuron projection development |
| GO_0008089 | Biological process | anterograde axonal transport |
| GO_0072384 | Biological process | organelle transport along microtubule |
| GO_0008625 | Biological process | extrinsic apoptotic signaling pathway via death domain receptors |
| GO_0032438 | Biological process | melanosome organization |
| GO_0097345 | Biological process | mitochondrial outer membrane permeabilization |
| GO_0048490 | Biological process | anterograde synaptic vesicle transport |
| GO_0016197 | Biological process | endosomal transport |
| GO_0060155 | Biological process | platelet dense granule organization |
| GO_0032418 | Biological process | lysosome localization |
| GO_0099078 | Cellular component | BORC complex |
| GO_0005739 | Cellular component | mitochondrion |
| GO_0005813 | Cellular component | centrosome |
| GO_0098574 | Cellular component | cytoplasmic side of lysosomal membrane |
| GO_0000930 | Cellular component | gamma-tubulin complex |
| GO_0005829 | Cellular component | cytosol |
| GO_0031083 | Cellular component | BLOC-1 complex |
| GO_1904115 | Cellular component | axon cytoplasm |
| GO_0043015 | Molecular function | gamma-tubulin binding |
| GO_0005515 | Molecular function | protein binding |
| Gene name | BLOC1S2 |
| Protein name | Alternative protein BLOC1S2 Biogenesis of lysosomal organelles complex 1 subunit 2 Biogenesis of lysosome-related organelles complex 1 subunit 2 Biogenesis of lysosomal organelles complex 1 subunit 2 (Biogenesis of lysosome-related organelles complex-1, subunit 2, isoform CRA_c) Biogenesis of lysosome-related organelles complex 1 subunit 2 (BLOC-1 subunit 2) (Centrosome-associated protein) |
| Synonyms | hCG_19416 CEAP BLOS2 |
| Description | FUNCTION: Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes . In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension (By similarity). As part of the BORC complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, the BORC complex may recruit ARL8B and couple lysosomes to microtubule plus-end-directed kinesin motor . May play a role in cell proliferation . . |
| Accessions | A0A087X1N6 ENST00000579542.1 ENST00000614731.4 [Q6QNY1-2] Q6QNY1 ENST00000618916.4 ENST00000441611.5 [Q6QNY1-2] ENST00000370372.7 [Q6QNY1-1] F1T0F0 L8E7A4 J3QRU7 |