Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 2931.03 | 2642 / 2642 | 100% | 64.10 | 705 / 705 |
breast | 100% | 1436.50 | 459 / 459 | 100% | 47.50 | 1118 / 1118 |
liver | 100% | 1203.84 | 226 / 226 | 100% | 26.99 | 406 / 406 |
ovary | 100% | 996.46 | 180 / 180 | 100% | 24.22 | 430 / 430 |
uterus | 100% | 924.91 | 170 / 170 | 100% | 55.19 | 459 / 459 |
esophagus | 100% | 1605.19 | 1443 / 1445 | 100% | 35.67 | 183 / 183 |
lung | 100% | 1838.76 | 577 / 578 | 100% | 45.88 | 1155 / 1155 |
prostate | 100% | 1413.60 | 245 / 245 | 100% | 35.18 | 501 / 502 |
kidney | 100% | 1664.96 | 89 / 89 | 100% | 36.54 | 899 / 901 |
thymus | 100% | 1427.44 | 652 / 653 | 100% | 54.40 | 604 / 605 |
adrenal gland | 100% | 1891.58 | 258 / 258 | 100% | 52.22 | 229 / 230 |
bladder | 100% | 1133.29 | 21 / 21 | 99% | 41.41 | 501 / 504 |
intestine | 100% | 1047.08 | 966 / 966 | 99% | 27.63 | 521 / 527 |
skin | 100% | 2220.34 | 1808 / 1809 | 99% | 38.39 | 466 / 472 |
stomach | 100% | 974.45 | 359 / 359 | 99% | 26.40 | 282 / 286 |
pancreas | 97% | 801.77 | 318 / 328 | 100% | 37.73 | 178 / 178 |
lymph node | 0% | 0 | 0 / 0 | 100% | 68.93 | 29 / 29 |
spleen | 100% | 2477.79 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 52.36 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 30.28 | 1 / 1 |
adipose | 100% | 1463.48 | 1203 / 1204 | 0% | 0 | 0 / 0 |
muscle | 100% | 2455.59 | 802 / 803 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 1010.87 | 1317 / 1335 | 0% | 0 | 0 / 0 |
heart | 96% | 877.20 | 829 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 28.01 | 77 / 80 |
peripheral blood | 91% | 1500.30 | 843 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0051036 | Biological process | regulation of endosome size |
GO_0062196 | Biological process | regulation of lysosome size |
GO_0031175 | Biological process | neuron projection development |
GO_0008089 | Biological process | anterograde axonal transport |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0008625 | Biological process | extrinsic apoptotic signaling pathway via death domain receptors |
GO_0032438 | Biological process | melanosome organization |
GO_0097345 | Biological process | mitochondrial outer membrane permeabilization |
GO_0048490 | Biological process | anterograde synaptic vesicle transport |
GO_0016197 | Biological process | endosomal transport |
GO_0060155 | Biological process | platelet dense granule organization |
GO_0032418 | Biological process | lysosome localization |
GO_0099078 | Cellular component | BORC complex |
GO_0005739 | Cellular component | mitochondrion |
GO_0005813 | Cellular component | centrosome |
GO_0098574 | Cellular component | cytoplasmic side of lysosomal membrane |
GO_0000930 | Cellular component | gamma-tubulin complex |
GO_0005829 | Cellular component | cytosol |
GO_0031083 | Cellular component | BLOC-1 complex |
GO_1904115 | Cellular component | axon cytoplasm |
GO_0043015 | Molecular function | gamma-tubulin binding |
GO_0005515 | Molecular function | protein binding |
Gene name | BLOC1S2 |
Protein name | Alternative protein BLOC1S2 Biogenesis of lysosomal organelles complex 1 subunit 2 Biogenesis of lysosome-related organelles complex 1 subunit 2 Biogenesis of lysosomal organelles complex 1 subunit 2 (Biogenesis of lysosome-related organelles complex-1, subunit 2, isoform CRA_c) Biogenesis of lysosome-related organelles complex 1 subunit 2 (BLOC-1 subunit 2) (Centrosome-associated protein) |
Synonyms | hCG_19416 CEAP BLOS2 |
Description | FUNCTION: Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes . In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension (By similarity). As part of the BORC complex may play a role in lysosomes movement and localization at the cell periphery. Associated with the cytosolic face of lysosomes, the BORC complex may recruit ARL8B and couple lysosomes to microtubule plus-end-directed kinesin motor . May play a role in cell proliferation . . |
Accessions | A0A087X1N6 ENST00000579542.1 ENST00000614731.4 [Q6QNY1-2] Q6QNY1 ENST00000618916.4 ENST00000441611.5 [Q6QNY1-2] ENST00000370372.7 [Q6QNY1-1] F1T0F0 L8E7A4 J3QRU7 |