BFAR report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
natural killer cell	8 studies	20% ± 4%	Explore
endothelial cell	7 studies	25% ± 7%	Explore
B cell	6 studies	21% ± 6%	Explore
non-classical monocyte	6 studies	26% ± 15%	Explore
CD16-positive, CD56-dim natural killer cell, human	6 studies	20% ± 3%	Explore
type I pneumocyte	5 studies	22% ± 5%	Explore
type II pneumocyte	5 studies	25% ± 9%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	19% ± 2%	Explore
CD8-positive, alpha-beta T cell	5 studies	21% ± 5%	Explore
epithelial cell	5 studies	34% ± 15%	Explore
gamma-delta T cell	5 studies	23% ± 11%	Explore
classical monocyte	4 studies	26% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	21% ± 5%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	4 studies	17% ± 0%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	4 studies	18% ± 2%	Explore
goblet cell	4 studies	23% ± 3%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	19% ± 4%	Explore
regulatory T cell	4 studies	19% ± 3%	Explore
memory B cell	4 studies	17% ± 2%	Explore
CD4-positive, alpha-beta T cell	3 studies	23% ± 1%	Explore
conventional dendritic cell	3 studies	25% ± 8%	Explore
exhausted T cell	3 studies	20% ± 5%	Explore
ciliated cell	3 studies	25% ± 7%	Explore
fibroblast	3 studies	22% ± 6%	Explore
abnormal cell	3 studies	20% ± 1%	Explore
dendritic cell	3 studies	32% ± 13%	Explore
basal cell	3 studies	26% ± 8%	Explore
naive B cell	3 studies	20% ± 4%	Explore
double negative thymocyte	3 studies	23% ± 6%	Explore
mucosal invariant T cell	3 studies	17% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	22% ± 6%	Explore
lung	4 studies	21% ± 4%	Explore
intestine	3 studies	21% ± 7%	Explore
liver	3 studies	21% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3441.21	459 / 459	100%	64.19	1118 / 1118
intestine	100%	2943.58	966 / 966	100%	59.58	527 / 527
kidney	100%	2487.40	89 / 89	100%	57.41	901 / 901
lung	100%	3970.99	578 / 578	100%	61.45	1155 / 1155
ovary	100%	2804.31	180 / 180	100%	44.26	430 / 430
pancreas	100%	2824.23	328 / 328	100%	62.15	178 / 178
stomach	100%	2392.69	359 / 359	100%	53.00	286 / 286
skin	100%	3171.19	1808 / 1809	100%	99.61	472 / 472
thymus	100%	2622.82	653 / 653	100%	52.98	604 / 605
bladder	100%	2962.33	21 / 21	100%	52.80	503 / 504
prostate	100%	2432.47	245 / 245	100%	40.30	501 / 502
uterus	100%	2793.94	170 / 170	100%	48.44	458 / 459
esophagus	100%	2242.16	1445 / 1445	99%	40.60	182 / 183
liver	100%	1392.74	226 / 226	99%	28.72	403 / 406
brain	99%	1357.31	2609 / 2642	100%	36.82	705 / 705
adrenal gland	100%	2491.79	258 / 258	98%	36.09	226 / 230
adipose	100%	3596.06	1204 / 1204	0%	0	0 / 0
blood vessel	100%	2865.55	1335 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	100%	96.44	80 / 80
lymph node	0%	0	0 / 0	100%	48.69	29 / 29
muscle	100%	2914.58	803 / 803	0%	0	0 / 0
spleen	100%	2489.60	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	38.68	45 / 45
ureter	0%	0	0 / 0	100%	25.08	1 / 1
heart	99%	1731.17	849 / 861	0%	0	0 / 0
peripheral blood	98%	2153.97	911 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0