Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 11 studies | 25% ± 9% | |
brain | 8 studies | 29% ± 11% | |
kidney | 6 studies | 23% ± 7% | |
eye | 6 studies | 29% ± 9% | |
peripheral blood | 5 studies | 24% ± 6% | |
pancreas | 4 studies | 48% ± 21% | |
liver | 4 studies | 24% ± 12% | |
placenta | 3 studies | 31% ± 8% | |
intestine | 3 studies | 22% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7579.46 | 1445 / 1445 | 100% | 80.59 | 183 / 183 |
kidney | 100% | 10182.71 | 89 / 89 | 100% | 141.26 | 901 / 901 |
lung | 100% | 7102.81 | 578 / 578 | 100% | 131.24 | 1155 / 1155 |
ovary | 100% | 4794.23 | 180 / 180 | 100% | 79.83 | 430 / 430 |
skin | 100% | 6578.59 | 1809 / 1809 | 100% | 198.63 | 472 / 472 |
stomach | 100% | 5056.01 | 359 / 359 | 100% | 86.11 | 286 / 286 |
brain | 100% | 12279.45 | 2640 / 2642 | 100% | 157.12 | 705 / 705 |
breast | 100% | 6898.33 | 459 / 459 | 100% | 130.27 | 1117 / 1118 |
intestine | 100% | 6607.97 | 966 / 966 | 100% | 90.87 | 526 / 527 |
uterus | 100% | 6220.26 | 170 / 170 | 100% | 121.89 | 458 / 459 |
thymus | 100% | 5184.93 | 652 / 653 | 100% | 132.72 | 604 / 605 |
prostate | 100% | 5610.74 | 244 / 245 | 100% | 124.29 | 502 / 502 |
bladder | 100% | 7079.24 | 21 / 21 | 99% | 115.48 | 501 / 504 |
adrenal gland | 100% | 9786.55 | 258 / 258 | 99% | 168.45 | 228 / 230 |
liver | 86% | 2219.88 | 194 / 226 | 100% | 84.74 | 406 / 406 |
pancreas | 86% | 1892.85 | 281 / 328 | 99% | 113.79 | 177 / 178 |
adipose | 100% | 7249.09 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 9383.51 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 177.28 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 147.06 | 29 / 29 |
spleen | 100% | 5995.80 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 133.47 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 85.06 | 1 / 1 |
muscle | 100% | 8272.05 | 802 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 5419.37 | 911 / 929 | 0% | 0 | 0 / 0 |
heart | 98% | 7871.26 | 840 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1902600 | Biological process | proton transmembrane transport |
GO_0097401 | Biological process | synaptic vesicle lumen acidification |
GO_0016241 | Biological process | regulation of macroautophagy |
GO_0005902 | Cellular component | microvillus |
GO_0016324 | Cellular component | apical plasma membrane |
GO_0000221 | Cellular component | vacuolar proton-transporting V-type ATPase, V1 domain |
GO_0030672 | Cellular component | synaptic vesicle membrane |
GO_0016469 | Cellular component | proton-transporting two-sector ATPase complex |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005768 | Cellular component | endosome |
GO_0005829 | Cellular component | cytosol |
GO_0030665 | Cellular component | clathrin-coated vesicle membrane |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0046961 | Molecular function | proton-transporting ATPase activity, rotational mechanism |
GO_0005515 | Molecular function | protein binding |
GO_0051117 | Molecular function | ATPase binding |
Gene name | ATP6V1E1 |
Protein name | V-type proton ATPase subunit E 1 (V-type proton ATPase subunit e 1) (Vacuolar proton pump subunit E 1) V-type proton ATPase subunit E 1 (V-ATPase subunit E 1) (V-ATPase 31 kDa subunit) (p31) (Vacuolar proton pump subunit E 1) |
Synonyms | ATP6E2 ATP6E hCG_21530 |
Description | FUNCTION: Subunit of the V1 complex of vacuolar(H+)-ATPase (V-ATPase), a multisubunit enzyme composed of a peripheral complex (V1) that hydrolyzes ATP and a membrane integral complex (V0) that translocates protons . V-ATPase is responsible for acidifying and maintaining the pH of intracellular compartments and in some cell types, is targeted to the plasma membrane, where it is responsible for acidifying the extracellular environment . . |
Accessions | P36543 ENST00000413576.1 Q53Y06 ENST00000253413.10 [P36543-1] ENST00000399796.6 [P36543-3] C9J8H1 ENST00000399798.6 [P36543-2] |