YIPF3 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
endothelial cell	22 studies	29% ± 12%	Explore
fibroblast	21 studies	28% ± 10%	Explore
endothelial cell of lymphatic vessel	15 studies	30% ± 11%	Explore
pericyte	12 studies	26% ± 8%	Explore
plasma cell	11 studies	30% ± 13%	Explore
connective tissue cell	11 studies	31% ± 12%	Explore
epithelial cell	11 studies	35% ± 20%	Explore
smooth muscle cell	10 studies	22% ± 5%	Explore
myofibroblast cell	9 studies	27% ± 6%	Explore
capillary endothelial cell	9 studies	28% ± 14%	Explore
endothelial cell of artery	9 studies	27% ± 15%	Explore
ciliated cell	9 studies	37% ± 16%	Explore
regulatory T cell	9 studies	20% ± 3%	Explore
type I pneumocyte	8 studies	29% ± 12%	Explore
basal cell	8 studies	37% ± 18%	Explore
abnormal cell	8 studies	25% ± 8%	Explore
natural killer cell	8 studies	20% ± 4%	Explore
classical monocyte	7 studies	25% ± 10%	Explore
non-classical monocyte	7 studies	27% ± 11%	Explore
plasmacytoid dendritic cell	7 studies	23% ± 5%	Explore
goblet cell	6 studies	29% ± 12%	Explore
vein endothelial cell	6 studies	27% ± 10%	Explore
CD8-positive, alpha-beta T cell	6 studies	19% ± 3%	Explore
macrophage	6 studies	21% ± 7%	Explore
neuron	6 studies	37% ± 20%	Explore
plasmablast	5 studies	38% ± 19%	Explore
club cell	5 studies	27% ± 9%	Explore
secretory cell	5 studies	31% ± 16%	Explore
CD16-negative, CD56-bright natural killer cell, human	5 studies	20% ± 3%	Explore
mesothelial cell	5 studies	35% ± 18%	Explore
B cell	5 studies	20% ± 5%	Explore
CD4-positive, alpha-beta memory T cell	4 studies	19% ± 2%	Explore
conventional dendritic cell	4 studies	33% ± 15%	Explore
exhausted T cell	4 studies	21% ± 6%	Explore
mature NK T cell	4 studies	16% ± 1%	Explore
retinal ganglion cell	4 studies	43% ± 28%	Explore
CD16-positive, CD56-dim natural killer cell, human	4 studies	20% ± 4%	Explore
type II pneumocyte	4 studies	32% ± 14%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	21% ± 2%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	18% ± 1%	Explore
endothelial cell of vascular tree	4 studies	25% ± 5%	Explore
glutamatergic neuron	4 studies	27% ± 7%	Explore
enteroendocrine cell	4 studies	36% ± 15%	Explore
hematopoietic precursor cell	3 studies	26% ± 10%	Explore
pancreatic A cell	3 studies	44% ± 7%	Explore
type B pancreatic cell	3 studies	42% ± 7%	Explore
CD4-positive, alpha-beta T cell	3 studies	19% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	18% ± 1%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	3 studies	16% ± 1%	Explore
glomerular endothelial cell	3 studies	24% ± 2%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	27% ± 5%	Explore
T cell	3 studies	21% ± 4%	Explore
neural crest cell	3 studies	20% ± 1%	Explore
amacrine cell	3 studies	31% ± 11%	Explore
retina horizontal cell	3 studies	26% ± 13%	Explore
retinal cone cell	3 studies	43% ± 13%	Explore
Mueller cell	3 studies	26% ± 8%	Explore
GABAergic neuron	3 studies	21% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	19% ± 2%	Explore
pancreatic ductal cell	3 studies	44% ± 15%	Explore
oligodendrocyte precursor cell	3 studies	27% ± 4%	Explore
hematopoietic stem cell	3 studies	23% ± 1%	Explore
gamma-delta T cell	3 studies	28% ± 13%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
lung	11 studies	28% ± 14%	Explore
peripheral blood	7 studies	21% ± 5%	Explore
intestine	7 studies	23% ± 11%	Explore
kidney	4 studies	19% ± 2%	Explore
brain	4 studies	22% ± 4%	Explore
pancreas	3 studies	44% ± 5%	Explore
placenta	3 studies	27% ± 9%	Explore
eye	3 studies	31% ± 11%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	4997.47	1445 / 1445	100%	114.22	183 / 183
liver	100%	4187.54	226 / 226	100%	137.47	406 / 406
ovary	100%	5776.97	180 / 180	100%	183.22	430 / 430
pancreas	100%	5664.52	328 / 328	100%	133.12	178 / 178
brain	100%	4335.77	2639 / 2642	100%	131.65	705 / 705
skin	100%	6016.65	1809 / 1809	100%	172.14	471 / 472
uterus	100%	5981.82	170 / 170	100%	124.07	458 / 459
thymus	100%	6388.77	653 / 653	100%	151.31	603 / 605
kidney	100%	5437.89	89 / 89	100%	118.24	898 / 901
lung	100%	5691.61	578 / 578	100%	139.25	1151 / 1155
stomach	100%	6077.59	359 / 359	100%	126.74	285 / 286
intestine	100%	5417.63	966 / 966	100%	130.48	525 / 527
prostate	100%	6422.96	245 / 245	100%	195.75	500 / 502
adrenal gland	100%	8739.39	258 / 258	100%	162.22	229 / 230
breast	100%	5797.32	459 / 459	99%	156.08	1110 / 1118
bladder	100%	5365.57	21 / 21	99%	136.98	498 / 504
adipose	100%	5541.35	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	193.97	80 / 80
lymph node	0%	0	0 / 0	100%	86.17	29 / 29
spleen	100%	5529.62	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	98.99	45 / 45
ureter	0%	0	0 / 0	100%	102.52	1 / 1
blood vessel	100%	5057.62	1334 / 1335	0%	0	0 / 0
peripheral blood	100%	5726.28	928 / 929	0%	0	0 / 0
muscle	100%	3581.53	802 / 803	0%	0	0 / 0
heart	100%	4041.24	858 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0030154	Biological process	cell differentiation
GO_0043231	Cellular component	intracellular membrane-bounded organelle
GO_0005794	Cellular component	Golgi apparatus
GO_0005886	Cellular component	plasma membrane
GO_0030133	Cellular component	transport vesicle
GO_0005515	Molecular function	protein binding

IV. Literature review

[source]

Gene name	YIPF3
Protein name	Protein YIPF3 (Killer lineage protein 1) (Natural killer cell-specific antigen KLIP1) (YIP1 family member 3) [Cleaved into: Protein YIPF3, 36 kDa form III] Yip1 domain family member 3 Protein YIPF3 (YIP1 family member 3)
Synonyms	C6orf109 KLIP1
Description	FUNCTION: Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis. . FUNCTION: Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis. . FUNCTION: Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis. . FUNCTION: Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis. . FUNCTION: Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis. .
Accessions	H0Y9A1 ENST00000416380.6 D6RA04 E7EQR8 ENST00000503972.5 ENST00000490447.6 ENST00000500090.2 D6RAY4 ENST00000506469.5 ENST00000511831.1 ENST00000372422.7 Q9GZM5 ENST00000510102.5 D6RBQ1 ENST00000460547.6 D6RFI3 ENST00000455768.6 D6RGY8

YIPF3 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review