TRAT1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
CD4-positive, alpha-beta T cell	29 studies	32% ± 11%	Explore
T cell	19 studies	26% ± 10%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	16 studies	31% ± 9%	Explore
CD8-positive, alpha-beta T cell	13 studies	28% ± 7%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	29% ± 13%	Explore
mucosal invariant T cell	10 studies	22% ± 4%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	8 studies	21% ± 5%	Explore
regulatory T cell	8 studies	22% ± 7%	Explore
gamma-delta T cell	8 studies	27% ± 9%	Explore
T follicular helper cell	7 studies	31% ± 10%	Explore
CD4-positive helper T cell	6 studies	27% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	26% ± 7%	Explore
effector memory CD4-positive, alpha-beta T cell	5 studies	36% ± 10%	Explore
effector CD8-positive, alpha-beta T cell	4 studies	19% ± 2%	Explore
exhausted T cell	4 studies	26% ± 3%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	32% ± 6%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	30% ± 10%	Explore
T-helper 17 cell	4 studies	31% ± 12%	Explore
T-helper 1 cell	3 studies	32% ± 10%	Explore
central memory CD4-positive, alpha-beta T cell	3 studies	37% ± 11%	Explore
double negative thymocyte	3 studies	30% ± 16%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	5 studies	17% ± 1%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	99%	135.46	570 / 578	65%	2.50	751 / 1155
breast	72%	40.82	332 / 459	53%	2.35	594 / 1118
stomach	50%	15.31	181 / 359	50%	1.74	142 / 286
spleen	100%	322.83	241 / 241	0%	0	0 / 0
kidney	39%	27.54	35 / 89	55%	2.36	500 / 901
thymus	58%	41.13	376 / 653	35%	9.16	211 / 605
intestine	58%	68.44	565 / 966	34%	1.01	178 / 527
skin	47%	17.88	854 / 1809	44%	2.50	210 / 472
adipose	88%	68.61	1055 / 1204	0%	0	0 / 0
peripheral blood	86%	248.54	801 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	86%	9.82	25 / 29
prostate	58%	25.13	142 / 245	27%	0.67	136 / 502
uterus	46%	15.35	78 / 170	36%	1.18	167 / 459
bladder	52%	39.81	11 / 21	28%	0.79	142 / 504
tonsil	0%	0	0 / 0	73%	3.70	33 / 45
liver	51%	15.81	115 / 226	20%	0.80	82 / 406
esophagus	24%	8.01	346 / 1445	34%	0.99	62 / 183
pancreas	5%	1.01	16 / 328	45%	1.57	80 / 178
ovary	23%	7.17	42 / 180	24%	0.56	103 / 430
blood vessel	42%	20.62	564 / 1335	0%	0	0 / 0
adrenal gland	23%	5.14	59 / 258	3%	0.05	8 / 230
heart	19%	6.46	166 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	11%	0.30	9 / 80
brain	2%	0.35	46 / 2642	3%	0.05	19 / 705
muscle	2%	0.58	17 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1