TPM1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	45 studies	50% ± 18%	Explore
endothelial cell	43 studies	37% ± 16%	Explore
pericyte	40 studies	69% ± 23%	Explore
smooth muscle cell	35 studies	79% ± 18%	Explore
basal cell	20 studies	37% ± 22%	Explore
connective tissue cell	18 studies	62% ± 21%	Explore
myofibroblast cell	16 studies	79% ± 18%	Explore
epithelial cell	16 studies	56% ± 26%	Explore
capillary endothelial cell	15 studies	41% ± 14%	Explore
endothelial cell of artery	13 studies	40% ± 15%	Explore
mesothelial cell	13 studies	69% ± 25%	Explore
vein endothelial cell	12 studies	31% ± 13%	Explore
ciliated cell	12 studies	39% ± 14%	Explore
macrophage	11 studies	27% ± 11%	Explore
astrocyte	10 studies	25% ± 12%	Explore
goblet cell	10 studies	60% ± 23%	Explore
secretory cell	10 studies	38% ± 14%	Explore
endothelial cell of vascular tree	10 studies	34% ± 16%	Explore
type II pneumocyte	9 studies	30% ± 20%	Explore
platelet	9 studies	48% ± 16%	Explore
oligodendrocyte precursor cell	9 studies	32% ± 11%	Explore
progenitor cell	8 studies	50% ± 25%	Explore
abnormal cell	8 studies	40% ± 16%	Explore
retinal rod cell	8 studies	40% ± 12%	Explore
type I pneumocyte	7 studies	30% ± 19%	Explore
GABAergic neuron	7 studies	34% ± 17%	Explore
glutamatergic neuron	7 studies	38% ± 20%	Explore
retinal cone cell	7 studies	52% ± 12%	Explore
cardiac muscle cell	7 studies	83% ± 14%	Explore
epithelial cell of proximal tubule	6 studies	36% ± 17%	Explore
renal alpha-intercalated cell	6 studies	56% ± 17%	Explore
megakaryocyte	6 studies	70% ± 26%	Explore
enterocyte	6 studies	48% ± 18%	Explore
brush cell	6 studies	69% ± 17%	Explore
club cell	6 studies	25% ± 12%	Explore
endothelial cell of lymphatic vessel	6 studies	20% ± 6%	Explore
neuron	6 studies	42% ± 16%	Explore
ionocyte	5 studies	43% ± 12%	Explore
erythroblast	5 studies	34% ± 14%	Explore
microglial cell	5 studies	32% ± 25%	Explore
adventitial cell	5 studies	38% ± 11%	Explore
erythrocyte	5 studies	29% ± 12%	Explore
adipocyte	5 studies	39% ± 24%	Explore
myoepithelial cell	5 studies	86% ± 9%	Explore
mast cell	4 studies	31% ± 13%	Explore
conventional dendritic cell	4 studies	23% ± 9%	Explore
kidney loop of Henle epithelial cell	4 studies	32% ± 10%	Explore
parietal epithelial cell	4 studies	69% ± 11%	Explore
enteroendocrine cell	4 studies	51% ± 18%	Explore
transit amplifying cell	4 studies	50% ± 23%	Explore
retinal ganglion cell	4 studies	62% ± 24%	Explore
glial cell	4 studies	29% ± 18%	Explore
myeloid cell	4 studies	35% ± 10%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	82% ± 4%	Explore
luminal cell of prostate epithelium	4 studies	27% ± 4%	Explore
interneuron	4 studies	43% ± 25%	Explore
glomerular endothelial cell	3 studies	35% ± 9%	Explore
kidney distal convoluted tubule epithelial cell	3 studies	42% ± 18%	Explore
intestinal crypt stem cell	3 studies	44% ± 8%	Explore
neural crest cell	3 studies	46% ± 10%	Explore
extravillous trophoblast	3 studies	95% ± 6%	Explore
placental villous trophoblast	3 studies	39% ± 26%	Explore
retinal pigment epithelial cell	3 studies	28% ± 10%	Explore
lymphocyte	3 studies	36% ± 14%	Explore
muscle cell	3 studies	85% ± 13%	Explore
acinar cell	3 studies	54% ± 30%	Explore
pancreatic ductal cell	3 studies	86% ± 4%	Explore
megakaryocyte-erythroid progenitor cell	3 studies	38% ± 22%	Explore
respiratory goblet cell	3 studies	35% ± 17%	Explore
hematopoietic stem cell	3 studies	31% ± 18%	Explore
progenitor cell of mammary luminal epithelium	3 studies	37% ± 15%	Explore
hepatocyte	3 studies	40% ± 17%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
lung	12 studies	34% ± 19%	Explore
eye	10 studies	29% ± 9%	Explore
intestine	9 studies	47% ± 22%	Explore
brain	8 studies	30% ± 14%	Explore
heart	7 studies	49% ± 19%	Explore
kidney	6 studies	36% ± 10%	Explore
uterus	5 studies	50% ± 22%	Explore
prostate	5 studies	23% ± 6%	Explore
breast	5 studies	38% ± 10%	Explore
pancreas	4 studies	37% ± 15%	Explore
placenta	4 studies	41% ± 27%	Explore
adipose	4 studies	25% ± 7%	Explore
liver	3 studies	35% ± 17%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
intestine	87%	111156.46	838 / 966	98%	61.82	519 / 527
uterus	96%	77008.60	164 / 170	79%	56.43	362 / 459
prostate	76%	49150.73	185 / 245	100%	96.01	500 / 502
breast	72%	21543.86	329 / 459	98%	69.66	1097 / 1118
bladder	86%	90921.00	18 / 21	82%	44.35	411 / 504
esophagus	69%	132979.22	999 / 1445	87%	31.79	160 / 183
stomach	46%	52340.50	165 / 359	98%	60.13	281 / 286
ovary	47%	14631.69	84 / 180	83%	22.28	358 / 430
pancreas	29%	11043.30	96 / 328	96%	87.89	171 / 178
lung	33%	7990.76	191 / 578	92%	37.59	1060 / 1155
kidney	20%	5603.13	18 / 89	94%	77.41	845 / 901
ureter	0%	0	0 / 0	100%	15.09	1 / 1
blood vessel	99%	92291.32	1323 / 1335	0%	0	0 / 0
heart	98%	317038.98	847 / 861	0%	0	0 / 0
muscle	96%	127398.12	773 / 803	0%	0	0 / 0
thymus	7%	1913.92	48 / 653	82%	20.78	497 / 605
brain	0%	31.46	3 / 2642	79%	15.59	554 / 705
adrenal gland	1%	153.26	2 / 258	72%	22.37	165 / 230
liver	0%	122.40	1 / 226	69%	22.42	281 / 406
skin	25%	7283.51	460 / 1809	43%	9.72	204 / 472
adipose	60%	17630.30	725 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	42%	13.29	19 / 45
lymph node	0%	0	0 / 0	21%	3.19	6 / 29
spleen	7%	1735.05	16 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	1%	0.14	1 / 80
peripheral blood	0%	49.85	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0