Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 6716.25 | 328 / 328 | 95% | 29.07 | 169 / 178 |
prostate | 92% | 8732.34 | 225 / 245 | 100% | 94.12 | 501 / 502 |
lung | 94% | 1912.67 | 544 / 578 | 91% | 31.13 | 1056 / 1155 |
thymus | 82% | 1384.41 | 534 / 653 | 97% | 51.36 | 584 / 605 |
bladder | 52% | 2677.05 | 11 / 21 | 86% | 51.63 | 435 / 504 |
stomach | 75% | 3397.84 | 268 / 359 | 64% | 9.37 | 183 / 286 |
breast | 51% | 1080.93 | 235 / 459 | 86% | 19.09 | 966 / 1118 |
esophagus | 39% | 4246.32 | 557 / 1445 | 89% | 30.52 | 162 / 183 |
lymph node | 0% | 0 | 0 / 0 | 100% | 35.30 | 29 / 29 |
spleen | 100% | 6102.12 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 47.40 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 49.71 | 1 / 1 |
peripheral blood | 97% | 5456.63 | 905 / 929 | 0% | 0 | 0 / 0 |
intestine | 31% | 786.80 | 303 / 966 | 66% | 13.11 | 348 / 527 |
uterus | 5% | 223.72 | 9 / 170 | 88% | 40.89 | 403 / 459 |
skin | 72% | 6583.71 | 1303 / 1809 | 18% | 3.05 | 86 / 472 |
ovary | 0% | 0 | 0 / 180 | 82% | 16.13 | 354 / 430 |
brain | 22% | 978.23 | 581 / 2642 | 1% | 0.11 | 4 / 705 |
kidney | 10% | 165.15 | 9 / 89 | 10% | 1.92 | 90 / 901 |
liver | 0% | 0 | 0 / 226 | 6% | 1.23 | 24 / 406 |
adrenal gland | 0% | 3.28 | 1 / 258 | 5% | 0.71 | 11 / 230 |
adipose | 3% | 44.96 | 35 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 3% | 0.19 | 2 / 80 |
blood vessel | 1% | 30.60 | 16 / 1335 | 0% | 0 | 0 / 0 |
muscle | 0% | 2.43 | 2 / 803 | 0% | 0 | 0 / 0 |
heart | 0% | 1.25 | 1 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006887 | Biological process | exocytosis |
GO_0070382 | Cellular component | exocytic vesicle |
GO_0042470 | Cellular component | melanosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005886 | Cellular component | plasma membrane |
GO_0031528 | Cellular component | microvillus membrane |
GO_0042043 | Molecular function | neurexin family protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0031267 | Molecular function | small GTPase binding |
Gene name | SYTL1 |
Protein name | Synaptotagmin like 1 Synaptotagmin-like protein 1 (Exophilin-7) (Protein JFC1) |
Synonyms | SLP1 SB146 |
Description | FUNCTION: May play a role in vesicle trafficking (By similarity). Binds phosphatidylinositol 3,4,5-trisphosphate. Acts as a RAB27A effector protein and may play a role in cytotoxic granule exocytosis in lymphocytes (By similarity). . |
Accessions | Q5SSC6 ENST00000318074.9 [Q8IYJ3-2] Q8IYJ3 ENST00000473280.1 ENST00000543823.1 [Q8IYJ3-1] ENST00000616558.5 [Q8IYJ3-1] ENST00000618673.4 A0A087X1N4 |