Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 23 studies | 30% ± 13% | |
macrophage | 11 studies | 34% ± 14% | |
oligodendrocyte | 11 studies | 32% ± 10% | |
oligodendrocyte precursor cell | 10 studies | 36% ± 17% | |
fibroblast | 10 studies | 32% ± 12% | |
astrocyte | 10 studies | 35% ± 14% | |
pericyte | 9 studies | 27% ± 10% | |
microglial cell | 9 studies | 29% ± 11% | |
adipocyte | 9 studies | 38% ± 13% | |
glutamatergic neuron | 8 studies | 45% ± 26% | |
natural killer cell | 7 studies | 20% ± 4% | |
GABAergic neuron | 7 studies | 48% ± 21% | |
myeloid cell | 7 studies | 25% ± 7% | |
mast cell | 7 studies | 22% ± 6% | |
smooth muscle cell | 7 studies | 27% ± 8% | |
epithelial cell | 6 studies | 33% ± 18% | |
endothelial cell of lymphatic vessel | 6 studies | 31% ± 10% | |
neuron | 5 studies | 33% ± 17% | |
interneuron | 5 studies | 48% ± 23% | |
cardiac muscle cell | 5 studies | 34% ± 10% | |
dendritic cell | 5 studies | 26% ± 5% | |
monocyte | 5 studies | 35% ± 8% | |
type I pneumocyte | 5 studies | 25% ± 8% | |
classical monocyte | 4 studies | 23% ± 7% | |
CD16-negative, CD56-bright natural killer cell, human | 4 studies | 23% ± 5% | |
CD16-positive, CD56-dim natural killer cell, human | 4 studies | 20% ± 3% | |
effector memory CD8-positive, alpha-beta T cell | 4 studies | 18% ± 2% | |
granule cell | 4 studies | 23% ± 4% | |
mesothelial cell | 4 studies | 33% ± 10% | |
lymphocyte | 4 studies | 29% ± 13% | |
retina horizontal cell | 4 studies | 22% ± 5% | |
retinal rod cell | 4 studies | 21% ± 4% | |
basal cell | 4 studies | 30% ± 20% | |
club cell | 4 studies | 24% ± 9% | |
type II pneumocyte | 4 studies | 21% ± 6% | |
leukocyte | 3 studies | 23% ± 5% | |
non-classical monocyte | 3 studies | 28% ± 7% | |
Mueller cell | 3 studies | 21% ± 0% | |
amacrine cell | 3 studies | 24% ± 5% | |
glycinergic amacrine cell | 3 studies | 22% ± 4% | |
endothelial cell of vascular tree | 3 studies | 30% ± 13% | |
hepatocyte | 3 studies | 40% ± 24% | |
T cell | 3 studies | 21% ± 2% | |
alveolar macrophage | 3 studies | 38% ± 11% | |
capillary endothelial cell | 3 studies | 23% ± 4% | |
goblet cell | 3 studies | 38% ± 28% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3008.07 | 1445 / 1445 | 100% | 27.73 | 183 / 183 |
brain | 100% | 2505.78 | 2641 / 2642 | 100% | 33.22 | 704 / 705 |
prostate | 100% | 2651.45 | 245 / 245 | 100% | 22.31 | 501 / 502 |
ovary | 100% | 2371.93 | 180 / 180 | 100% | 18.29 | 429 / 430 |
lung | 100% | 2974.01 | 577 / 578 | 100% | 20.47 | 1153 / 1155 |
breast | 100% | 3159.62 | 459 / 459 | 100% | 29.15 | 1114 / 1118 |
thymus | 100% | 3256.90 | 653 / 653 | 100% | 27.37 | 602 / 605 |
kidney | 100% | 2430.04 | 89 / 89 | 99% | 24.99 | 893 / 901 |
bladder | 100% | 3056.52 | 21 / 21 | 99% | 17.25 | 499 / 504 |
intestine | 100% | 3274.34 | 966 / 966 | 98% | 17.23 | 519 / 527 |
pancreas | 99% | 1445.73 | 326 / 328 | 99% | 19.83 | 176 / 178 |
uterus | 100% | 2977.86 | 170 / 170 | 98% | 18.35 | 451 / 459 |
stomach | 100% | 2198.22 | 359 / 359 | 98% | 17.78 | 281 / 286 |
adrenal gland | 100% | 2627.10 | 258 / 258 | 98% | 22.46 | 225 / 230 |
skin | 100% | 2551.41 | 1809 / 1809 | 96% | 22.90 | 453 / 472 |
liver | 100% | 1079.26 | 226 / 226 | 84% | 8.29 | 340 / 406 |
adipose | 100% | 3307.54 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3136.54 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 13.83 | 29 / 29 |
muscle | 100% | 5093.90 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3099.73 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 17.16 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 4.60 | 1 / 1 |
heart | 98% | 2200.54 | 840 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 3304.25 | 891 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 91% | 12.76 | 73 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0042129 | Biological process | regulation of T cell proliferation |
GO_0007265 | Biological process | Ras protein signal transduction |
GO_2000973 | Biological process | regulation of pro-B cell differentiation |
GO_0008286 | Biological process | insulin receptor signaling pathway |
GO_0033081 | Biological process | regulation of T cell differentiation in thymus |
GO_0001782 | Biological process | B cell homeostasis |
GO_0051057 | Biological process | positive regulation of small GTPase mediated signal transduction |
GO_0005829 | Cellular component | cytosol |
GO_0005886 | Cellular component | plasma membrane |
GO_0046982 | Molecular function | protein heterodimerization activity |
GO_0005085 | Molecular function | guanyl-nucleotide exchange factor activity |
GO_0005515 | Molecular function | protein binding |
Gene name | SOS2 |
Protein name | Son of sevenless homolog 2 (SOS-2) SOS Ras/Rho guanine nucleotide exchange factor 2 SOS2 Son of sevenless homolog 2 (Drosophila) |
Synonyms | |
Description | FUNCTION: Promotes the exchange of Ras-bound GDP by GTP. . |
Accessions | A0A2X0TW17 G3V5W3 ENST00000543680.5 [Q07890-2] ENST00000216373.10 [Q07890-1] A0A087X277 ENST00000556452.1 ENST00000555794.2 B7ZKT5 Q07890 |