SDF2L1 | OmnibusX

I. Expression across cell types

Name	Number of supported studies	Average coverage
natural killer cell	25 studies	25% ± 8%	Explore
plasma cell	23 studies	63% ± 20%	Explore
macrophage	23 studies	25% ± 10%	Explore
CD8-positive, alpha-beta T cell	18 studies	29% ± 12%	Explore
conventional dendritic cell	14 studies	27% ± 11%	Explore
CD16-positive, CD56-dim natural killer cell, human	13 studies	27% ± 7%	Explore
gamma-delta T cell	13 studies	25% ± 10%	Explore
plasmacytoid dendritic cell	13 studies	26% ± 10%	Explore
plasmablast	12 studies	68% ± 23%	Explore
T cell	12 studies	23% ± 7%	Explore
mast cell	12 studies	23% ± 6%	Explore
CD4-positive, alpha-beta T cell	11 studies	26% ± 10%	Explore
regulatory T cell	11 studies	22% ± 7%	Explore
ciliated cell	10 studies	29% ± 11%	Explore
mature NK T cell	10 studies	22% ± 6%	Explore
monocyte	10 studies	27% ± 8%	Explore
endothelial cell	10 studies	26% ± 10%	Explore
epithelial cell	10 studies	37% ± 18%	Explore
classical monocyte	8 studies	30% ± 12%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	24% ± 7%	Explore
IgA plasma cell	8 studies	51% ± 19%	Explore
IgG plasma cell	8 studies	54% ± 17%	Explore
mucosal invariant T cell	8 studies	21% ± 2%	Explore
myeloid cell	8 studies	28% ± 10%	Explore
CD8-positive, alpha-beta memory T cell	7 studies	26% ± 4%	Explore
goblet cell	7 studies	28% ± 10%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	24% ± 5%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	33% ± 19%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	6 studies	21% ± 4%	Explore
non-classical monocyte	6 studies	31% ± 11%	Explore
abnormal cell	6 studies	19% ± 3%	Explore
mononuclear phagocyte	5 studies	32% ± 15%	Explore
transit amplifying cell	5 studies	27% ± 9%	Explore
innate lymphoid cell	5 studies	20% ± 2%	Explore
secretory cell	5 studies	24% ± 13%	Explore
basal cell	5 studies	28% ± 14%	Explore
pancreatic A cell	4 studies	56% ± 15%	Explore
type B pancreatic cell	4 studies	52% ± 20%	Explore
leukocyte	4 studies	30% ± 11%	Explore
effector memory CD8-positive, alpha-beta T cell	4 studies	27% ± 6%	Explore
exhausted T cell	4 studies	33% ± 9%	Explore
hematopoietic precursor cell	4 studies	35% ± 15%	Explore
fibroblast	4 studies	30% ± 12%	Explore
luminal hormone-sensing cell of mammary gland	4 studies	27% ± 7%	Explore
IgM plasma cell	4 studies	48% ± 20%	Explore
dendritic cell	4 studies	40% ± 14%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	25% ± 9%	Explore
enteroendocrine cell	4 studies	27% ± 11%	Explore
club cell	3 studies	22% ± 6%	Explore
duct epithelial cell	3 studies	23% ± 1%	Explore
pancreatic D cell	3 studies	64% ± 13%	Explore
B cell	3 studies	31% ± 11%	Explore
extravillous trophoblast	3 studies	42% ± 13%	Explore
common myeloid progenitor	3 studies	27% ± 9%	Explore
enterocyte	3 studies	21% ± 2%	Explore
intraepithelial lymphocyte	3 studies	25% ± 4%	Explore
T follicular helper cell	3 studies	16% ± 1%	Explore
effector CD4-positive, alpha-beta T cell	3 studies	25% ± 4%	Explore
intermediate monocyte	3 studies	33% ± 12%	Explore
endothelial cell of vascular tree	3 studies	19% ± 1%	Explore
granulocyte monocyte progenitor cell	3 studies	55% ± 18%	Explore
pericyte	3 studies	17% ± 1%	Explore
T-helper 17 cell	3 studies	33% ± 18%	Explore
connective tissue cell	3 studies	20% ± 3%	Explore

II. Expression across tissues

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	23% ± 5%	Explore
lung	9 studies	25% ± 10%	Explore
intestine	8 studies	24% ± 9%	Explore
pancreas	4 studies	46% ± 20%	Explore
liver	4 studies	26% ± 11%	Explore
kidney	3 studies	20% ± 2%	Explore
breast	3 studies	16% ± 1%	Explore

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	100%	3136.69	226 / 226	100%	139.72	406 / 406
uterus	100%	905.32	170 / 170	100%	101.29	458 / 459
stomach	100%	1042.52	359 / 359	99%	106.21	284 / 286
pancreas	100%	1669.41	327 / 328	99%	78.29	177 / 178
intestine	100%	1069.91	964 / 966	99%	121.66	523 / 527
thymus	100%	3327.33	653 / 653	99%	123.29	599 / 605
prostate	100%	1158.51	244 / 245	99%	100.43	498 / 502
bladder	100%	1162.00	21 / 21	99%	108.04	497 / 504
skin	99%	894.90	1787 / 1809	99%	109.06	467 / 472
lung	99%	1276.09	573 / 578	98%	95.82	1137 / 1155
esophagus	100%	820.92	1440 / 1445	98%	67.21	179 / 183
kidney	100%	1304.69	89 / 89	96%	50.42	866 / 901
breast	99%	830.68	456 / 459	96%	67.25	1072 / 1118
adrenal gland	100%	1290.30	258 / 258	94%	72.98	217 / 230
ovary	93%	502.07	168 / 180	98%	67.55	420 / 430
brain	88%	499.32	2335 / 2642	89%	39.51	629 / 705
lymph node	0%	0	0 / 0	100%	158.30	29 / 29
spleen	100%	2258.52	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	76.29	45 / 45
ureter	0%	0	0 / 0	100%	80.34	1 / 1
blood vessel	98%	968.40	1312 / 1335	0%	0	0 / 0
adipose	98%	822.66	1183 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	98%	58.76	78 / 80
heart	95%	885.18	819 / 861	0%	0	0 / 0
peripheral blood	95%	1021.82	878 / 929	0%	0	0 / 0
muscle	66%	302.56	527 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0

III. Associated gene sets

GO_0071218	Biological process	cellular response to misfolded protein
GO_0042981	Biological process	regulation of apoptotic process
GO_0051085	Biological process	chaperone cofactor-dependent protein refolding
GO_0036503	Biological process	ERAD pathway
GO_0005788	Cellular component	endoplasmic reticulum lumen
GO_0101031	Cellular component	protein folding chaperone complex
GO_0034663	Cellular component	endoplasmic reticulum chaperone complex
GO_0005783	Cellular component	endoplasmic reticulum
GO_0016020	Cellular component	membrane
GO_0051087	Molecular function	protein-folding chaperone binding
GO_0051787	Molecular function	misfolded protein binding
GO_0005515	Molecular function	protein binding
GO_0051117	Molecular function	ATPase binding

IV. Literature review

[source]

Gene name	SDF2L1
Protein name	Stromal cell-derived factor 2-like protein 1 (SDF2-like protein 1) (PWP1-interacting protein 8)
Synonyms	UNQ1941/PRO4424
Description
Accessions	Q9HCN8 ENST00000248958.5

SDF2L1 report

I. Expression across cell types

II. Expression across tissues

III. Associated gene sets

IV. Literature review