RNF13 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
macrophage	38 studies	42% ± 16%	Explore
endothelial cell	31 studies	27% ± 10%	Explore
fibroblast	23 studies	24% ± 9%	Explore
classical monocyte	23 studies	29% ± 7%	Explore
non-classical monocyte	22 studies	40% ± 10%	Explore
monocyte	17 studies	36% ± 13%	Explore
astrocyte	16 studies	34% ± 15%	Explore
oligodendrocyte	16 studies	57% ± 18%	Explore
microglial cell	16 studies	42% ± 15%	Explore
myeloid cell	14 studies	41% ± 16%	Explore
basal cell	13 studies	29% ± 16%	Explore
conventional dendritic cell	13 studies	29% ± 11%	Explore
endothelial cell of lymphatic vessel	12 studies	24% ± 7%	Explore
oligodendrocyte precursor cell	12 studies	36% ± 16%	Explore
type I pneumocyte	11 studies	29% ± 10%	Explore
B cell	11 studies	22% ± 7%	Explore
capillary endothelial cell	11 studies	21% ± 4%	Explore
GABAergic neuron	10 studies	39% ± 21%	Explore
glutamatergic neuron	10 studies	42% ± 27%	Explore
dendritic cell	10 studies	35% ± 11%	Explore
plasmacytoid dendritic cell	10 studies	26% ± 7%	Explore
epithelial cell	9 studies	36% ± 18%	Explore
ciliated cell	9 studies	24% ± 8%	Explore
alveolar macrophage	8 studies	57% ± 12%	Explore
endothelial cell of vascular tree	8 studies	23% ± 8%	Explore
adipocyte	8 studies	26% ± 7%	Explore
naive B cell	8 studies	20% ± 5%	Explore
neutrophil	7 studies	26% ± 4%	Explore
mononuclear phagocyte	7 studies	38% ± 13%	Explore
pericyte	7 studies	22% ± 5%	Explore
club cell	7 studies	25% ± 9%	Explore
vein endothelial cell	7 studies	22% ± 10%	Explore
neuron	6 studies	40% ± 21%	Explore
interneuron	6 studies	42% ± 23%	Explore
retinal rod cell	6 studies	20% ± 3%	Explore
Mueller cell	6 studies	28% ± 7%	Explore
type II pneumocyte	6 studies	31% ± 8%	Explore
natural killer cell	6 studies	18% ± 2%	Explore
smooth muscle cell	6 studies	19% ± 2%	Explore
endothelial cell of artery	5 studies	18% ± 2%	Explore
retinal ganglion cell	5 studies	45% ± 19%	Explore
precursor B cell	5 studies	34% ± 4%	Explore
CD16-positive, CD56-dim natural killer cell, human	5 studies	17% ± 1%	Explore
lymphocyte	5 studies	21% ± 7%	Explore
myofibroblast cell	5 studies	19% ± 3%	Explore
connective tissue cell	5 studies	21% ± 5%	Explore
secretory cell	4 studies	19% ± 2%	Explore
glial cell	4 studies	23% ± 6%	Explore
plasma cell	4 studies	24% ± 9%	Explore
amacrine cell	4 studies	27% ± 5%	Explore
retinal bipolar neuron	4 studies	23% ± 6%	Explore
retinal cone cell	4 studies	29% ± 9%	Explore
retinal pigment epithelial cell	4 studies	45% ± 18%	Explore
mucus secreting cell	4 studies	29% ± 6%	Explore
cardiac muscle cell	4 studies	23% ± 2%	Explore
abnormal cell	4 studies	26% ± 8%	Explore
hepatocyte	4 studies	47% ± 17%	Explore
CD8-positive, alpha-beta T cell	4 studies	17% ± 2%	Explore
leukocyte	4 studies	30% ± 15%	Explore
T cell	4 studies	23% ± 6%	Explore
glomerular endothelial cell	3 studies	25% ± 5%	Explore
GABAergic interneuron	3 studies	23% ± 2%	Explore
immature B cell	3 studies	33% ± 11%	Explore
retina horizontal cell	3 studies	25% ± 5%	Explore
serous secreting cell	3 studies	26% ± 6%	Explore
effector memory CD8-positive, alpha-beta T cell	3 studies	16% ± 0%	Explore
mesothelial cell	3 studies	26% ± 7%	Explore
tissue-resident macrophage	3 studies	37% ± 13%	Explore
GABAergic amacrine cell	3 studies	27% ± 11%	Explore
OFF-bipolar cell	3 studies	23% ± 6%	Explore
ON-bipolar cell	3 studies	24% ± 5%	Explore
glycinergic amacrine cell	3 studies	20% ± 4%	Explore
rod bipolar cell	3 studies	28% ± 9%	Explore
intermediate monocyte	3 studies	40% ± 15%	Explore
muscle cell	3 studies	31% ± 13%	Explore
ependymal cell	3 studies	36% ± 19%	Explore
adventitial cell	3 studies	25% ± 6%	Explore
granule cell	3 studies	25% ± 5%	Explore
mast cell	3 studies	22% ± 6%	Explore
double negative thymocyte	3 studies	17% ± 2%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	3 studies	16% ± 1%	Explore
memory B cell	3 studies	16% ± 0%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	18 studies	40% ± 22%	Explore
lung	15 studies	26% ± 9%	Explore
peripheral blood	10 studies	20% ± 5%	Explore
eye	8 studies	27% ± 12%	Explore
heart	4 studies	22% ± 1%	Explore
kidney	4 studies	20% ± 2%	Explore
liver	4 studies	28% ± 9%	Explore
adipose	4 studies	28% ± 6%	Explore
placenta	3 studies	21% ± 6%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
breast	100%	3867.26	459 / 459	100%	62.06	1118 / 1118
esophagus	100%	2780.81	1445 / 1445	100%	60.52	183 / 183
lung	100%	4544.34	578 / 578	100%	67.65	1155 / 1155
brain	100%	4216.79	2639 / 2642	100%	100.91	704 / 705
kidney	100%	2677.61	89 / 89	100%	72.78	897 / 901
prostate	100%	2918.43	244 / 245	100%	67.11	501 / 502
thymus	100%	3519.14	653 / 653	99%	68.53	601 / 605
ovary	100%	2371.33	180 / 180	99%	32.25	427 / 430
bladder	100%	3096.95	21 / 21	99%	43.57	500 / 504
stomach	100%	2363.47	359 / 359	99%	44.87	283 / 286
uterus	100%	2966.62	170 / 170	99%	43.93	453 / 459
intestine	100%	3040.51	966 / 966	98%	42.91	519 / 527
pancreas	99%	1860.38	326 / 328	99%	45.17	176 / 178
liver	100%	2189.25	226 / 226	97%	35.47	395 / 406
adrenal gland	100%	2934.11	258 / 258	97%	36.94	223 / 230
skin	100%	3019.90	1809 / 1809	94%	56.30	442 / 472
blood vessel	100%	3467.60	1335 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	100%	38.47	29 / 29
spleen	100%	3608.43	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	53.91	45 / 45
ureter	0%	0	0 / 0	100%	22.97	1 / 1
adipose	100%	4175.16	1203 / 1204	0%	0	0 / 0
muscle	100%	2029.79	800 / 803	0%	0	0 / 0
peripheral blood	98%	4724.60	914 / 929	0%	0	0 / 0
heart	97%	1700.25	831 / 861	0%	0	0 / 0
eye	0%	0	0 / 0	76%	22.28	61 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0