PXN report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	36 studies	27% ± 10%	Explore
natural killer cell	21 studies	28% ± 7%	Explore
endothelial cell of lymphatic vessel	15 studies	33% ± 13%	Explore
CD16-positive, CD56-dim natural killer cell, human	14 studies	35% ± 7%	Explore
classical monocyte	14 studies	23% ± 7%	Explore
capillary endothelial cell	13 studies	25% ± 7%	Explore
ciliated cell	9 studies	24% ± 6%	Explore
CD16-negative, CD56-bright natural killer cell, human	8 studies	24% ± 4%	Explore
endothelial cell of vascular tree	8 studies	27% ± 11%	Explore
vein endothelial cell	8 studies	31% ± 14%	Explore
CD4-positive, alpha-beta T cell	7 studies	17% ± 2%	Explore
CD8-positive, alpha-beta T cell	7 studies	25% ± 7%	Explore
effector memory CD8-positive, alpha-beta T cell	7 studies	18% ± 4%	Explore
mature NK T cell	7 studies	22% ± 4%	Explore
mucosal invariant T cell	6 studies	19% ± 2%	Explore
CD4-positive, alpha-beta memory T cell	6 studies	18% ± 2%	Explore
gamma-delta T cell	6 studies	25% ± 5%	Explore
retinal cone cell	5 studies	25% ± 7%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	5 studies	17% ± 1%	Explore
T cell	5 studies	18% ± 3%	Explore
type I pneumocyte	5 studies	24% ± 5%	Explore
epithelial cell	4 studies	36% ± 6%	Explore
endothelial cell of artery	4 studies	22% ± 4%	Explore
effector memory CD4-positive, alpha-beta T cell	4 studies	19% ± 6%	Explore
goblet cell	4 studies	22% ± 2%	Explore
macrophage	4 studies	20% ± 2%	Explore
CD8-positive, alpha-beta memory T cell	4 studies	24% ± 5%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	4 studies	22% ± 5%	Explore
glomerular endothelial cell	3 studies	21% ± 2%	Explore
extravillous trophoblast	3 studies	30% ± 6%	Explore
lymphocyte	3 studies	23% ± 4%	Explore
regulatory T cell	3 studies	18% ± 1%	Explore
retinal rod cell	3 studies	31% ± 10%	Explore
fibroblast	3 studies	19% ± 3%	Explore
GABAergic neuron	3 studies	19% ± 3%	Explore
dendritic cell	3 studies	25% ± 9%	Explore
abnormal cell	3 studies	21% ± 1%	Explore
enteroendocrine cell	3 studies	17% ± 3%	Explore
monocyte	3 studies	18% ± 1%	Explore
basal cell	3 studies	35% ± 23%	Explore
astrocyte	3 studies	24% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	10 studies	20% ± 4%	Explore
eye	3 studies	29% ± 3%	Explore
brain	3 studies	18% ± 2%	Explore
lung	3 studies	16% ± 1%	Explore
intestine	3 studies	17% ± 1%	Explore
adipose	3 studies	19% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
skin	100%	8498.89	1808 / 1809	100%	41.83	472 / 472
thymus	100%	10907.42	652 / 653	100%	26.97	605 / 605
intestine	100%	12603.77	966 / 966	100%	29.78	526 / 527
prostate	100%	12195.55	244 / 245	100%	25.14	502 / 502
bladder	100%	13492.95	21 / 21	99%	27.10	500 / 504
kidney	100%	8790.39	89 / 89	99%	26.01	893 / 901
stomach	100%	6679.36	358 / 359	99%	27.35	284 / 286
ovary	99%	5896.31	179 / 180	100%	26.62	428 / 430
lung	100%	13983.01	578 / 578	99%	23.29	1141 / 1155
adrenal gland	100%	8075.36	258 / 258	99%	16.16	227 / 230
breast	100%	14200.83	459 / 459	98%	19.53	1101 / 1118
esophagus	99%	9147.65	1428 / 1445	99%	34.76	182 / 183
uterus	100%	14544.13	170 / 170	98%	22.98	448 / 459
pancreas	84%	2725.86	275 / 328	99%	29.03	176 / 178
brain	48%	1782.45	1261 / 2642	99%	15.58	697 / 705
liver	60%	1680.16	135 / 226	80%	8.05	323 / 406
adipose	100%	14326.94	1204 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	100%	18.60	80 / 80
muscle	100%	14611.76	803 / 803	0%	0	0 / 0
spleen	100%	10368.01	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	29.87	1 / 1
heart	100%	8681.14	860 / 861	0%	0	0 / 0
blood vessel	99%	6905.28	1327 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	98%	16.41	44 / 45
peripheral blood	91%	17749.16	848 / 929	0%	0	0 / 0
lymph node	0%	0	0 / 0	86%	9.48	25 / 29
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0