PTPRCAP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
regulatory T cell	22 studies	59% ± 24%	Explore
CD8-positive, alpha-beta T cell	21 studies	57% ± 27%	Explore
natural killer cell	20 studies	61% ± 23%	Explore
memory B cell	16 studies	54% ± 28%	Explore
B cell	15 studies	71% ± 20%	Explore
CD4-positive, alpha-beta T cell	15 studies	57% ± 25%	Explore
gamma-delta T cell	13 studies	48% ± 25%	Explore
naive B cell	13 studies	55% ± 21%	Explore
plasmacytoid dendritic cell	12 studies	59% ± 23%	Explore
T cell	12 studies	51% ± 27%	Explore
CD16-negative, CD56-bright natural killer cell, human	11 studies	54% ± 19%	Explore
mucosal invariant T cell	11 studies	62% ± 24%	Explore
naive thymus-derived CD4-positive, alpha-beta T cell	11 studies	68% ± 13%	Explore
naive thymus-derived CD8-positive, alpha-beta T cell	11 studies	71% ± 21%	Explore
CD16-positive, CD56-dim natural killer cell, human	11 studies	59% ± 23%	Explore
mature NK T cell	10 studies	73% ± 12%	Explore
CD4-positive, alpha-beta memory T cell	10 studies	51% ± 27%	Explore
CD8-positive, alpha-beta memory T cell	10 studies	47% ± 26%	Explore
effector memory CD8-positive, alpha-beta T cell	6 studies	61% ± 19%	Explore
plasma cell	6 studies	64% ± 18%	Explore
plasmablast	6 studies	69% ± 13%	Explore
effector CD8-positive, alpha-beta T cell	6 studies	64% ± 29%	Explore
effector memory CD8-positive, alpha-beta T cell, terminally differentiated	5 studies	59% ± 23%	Explore
innate lymphoid cell	5 studies	54% ± 17%	Explore
CD4-positive helper T cell	4 studies	42% ± 20%	Explore
exhausted T cell	4 studies	84% ± 22%	Explore
precursor B cell	4 studies	42% ± 20%	Explore
immature B cell	4 studies	67% ± 20%	Explore
T follicular helper cell	4 studies	60% ± 23%	Explore
double negative thymocyte	4 studies	58% ± 27%	Explore
effector CD4-positive, alpha-beta T cell	4 studies	69% ± 29%	Explore
CD4-positive, alpha-beta cytotoxic T cell	3 studies	64% ± 29%	Explore
central memory CD8-positive, alpha-beta T cell	3 studies	67% ± 11%	Explore
intraepithelial lymphocyte	3 studies	72% ± 19%	Explore
group 3 innate lymphoid cell	3 studies	19% ± 0%	Explore
double-positive, alpha-beta thymocyte	3 studies	57% ± 24%	Explore
erythrocyte	3 studies	40% ± 17%	Explore
effector memory CD4-positive, alpha-beta T cell	3 studies	56% ± 22%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
peripheral blood	11 studies	51% ± 14%	Explore
lymph node	3 studies	52% ± 25%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
abdomen	0%	0	0 / 0	0%	0	0 / 0
adipose	0%	0	0 / 0	0%	0	0 / 0
adrenal gland	0%	0	0 / 0	0%	0	0 / 230
bladder	0%	0	0 / 0	0%	0	0 / 504
blood vessel	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
brain	0%	0	0 / 0	0%	0	0 / 705
breast	0%	0	0 / 0	0%	0	0 / 1118
diaphragm	0%	0	0 / 0	0%	0	0 / 0
esophagus	0%	0	0 / 0	0%	0	0 / 183
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
heart	0%	0	0 / 0	0%	0	0 / 0
intestine	0%	0	0 / 0	0%	0	0 / 527
kidney	0%	0	0 / 0	0%	0	0 / 901
liver	0%	0	0 / 0	0%	0	0 / 406
lung	0%	0	0 / 0	0%	0	0 / 1155
lymph node	0%	0	0 / 0	0%	0	0 / 29
muscle	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
ovary	0%	0	0 / 0	0%	0	0 / 430
pancreas	0%	0	0 / 0	0%	0	0 / 178
peripheral blood	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
prostate	0%	0	0 / 0	0%	0	0 / 502
skin	0%	0	0 / 0	0%	0	0 / 472
spinal column	0%	0	0 / 0	0%	0	0 / 0
spleen	0%	0	0 / 0	0%	0	0 / 0
stomach	0%	0	0 / 0	0%	0	0 / 286
thymus	0%	0	0 / 0	0%	0	0 / 605
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1
uterus	0%	0	0 / 0	0%	0	0 / 459